Limnohabitans sp. Hippo3 LimC-Hippo3-C31

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Hippo3 LimC-Hippo3-C31 is characterized by having a single replicon, which is indicative of its genomic organization. The genome of this strain is accessible under the accession number NESF00000000.1, providing a resource for further genetic and functional studies. The single replicon structure can suggest a streamlined genomic architecture, which may be advantageous for adaptation to specific ecological niches. This trait is often observed in aquatic microorganisms, allowing for efficient replication and regulation of essential genes in fluctuating environments. Understanding the genomic features of Limnohabitans sp. Hippo3 LimC-Hippo3-C31 contributes to our knowledge of microbial diversity in freshwater ecosystems. Given that Limnohabitans species are often associated with water bodies, their ecological roles could include biogeochemical cycling and interactions within microbial communities. The streamlined genomic structure might also facilitate rapid responses to environmental changes, highlighting the adaptability of this strain in freshwater habitats. Overall, the genomic insights into Limnohabitans sp. Hippo3 LimC-Hippo3-C31 underscore its potential significance in the context of freshwater microbiology, where single replicon organisms may serve as key players in maintaining ecosystem stability and functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Hippo3
StrainLimC-Hippo3-C31

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Hippo3 LimC-Hippo3-C31, whole genome shotgun

Gene Summary

Adenine Count

585815 bp

Thymine Count

578112 bp

Guanine Count

913355 bp

Cytosine Count

913399 bp

Genome Length

2990681 bp

Protein-coding Genes

2805 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
apolipoprotein n-acyltransferaseB9Z34_12645Not AvailablePositive2637416 - 263897855637.3
glycine--trna ligase subunit alphaB9Z34_12650Not AvailablePositive2639048 - 263995334301.6
glycine--trna ligase subunit betaB9Z34_12655Not AvailablePositive2639968 - 264215778201.3
d-glycero-beta-d-manno-heptose-1,7-bisphosphate 7-phosphataseB9Z34_12660Not AvailablePositive2642171 - 264274620181.3
1-acyl-sn-glycerol-3-phosphate acyltransferaseB9Z34_12665Not AvailablePositive2642760 - 264350928022.7
hypothetical proteinB9Z34_12670Not AvailablePositive2643527 - 264442333244.1
zn-dependent hydrolaseB9Z34_12675Not AvailableNegative2644393 - 264553842263.9
merr family transcriptional regulatorB9Z34_12680Not AvailablePositive2645668 - 264607215165.1
phenylacetic acid degradation proteinB9Z34_12685Not AvailablePositive2646149 - 264659515474.7
acyl-coa dehydrogenaseB9Z34_12690Not AvailablePositive2646639 - 264782042763.6

Displaying genes 2511 – 2520 of 2856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.