Limnohabitans sp. Jir61 LimA-Jir61-C8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Jir61 LimA-Jir61-C8 is characterized by a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various aquatic environments. The organism is cataloged under the accession number NESD00000000.1, which provides a reference for researchers interested in its genetic and functional attributes. This bacterium belongs to the genus Limnohabitans, known for its ecological significance in freshwater ecosystems. Members of this genus are often involved in biogeochemical cycling, particularly with respect to nutrient dynamics and organic matter decomposition. The presence of a single replicon can suggest a specialization that allows Limnohabitans sp. Jir61 to efficiently exploit its niche, potentially enhancing its survival and metabolic capabilities in fluctuating environmental conditions. The ecological role of Limnohabitans sp. Jir61 LimA-Jir61-C8 may extend to interactions with other microbial communities, contributing to the overall health and stability of aquatic ecosystems. By participating in nutrient cycling and organic matter degradation, this bacterium plays a crucial part in maintaining the balance of microbial communities in freshwater habitats. Understanding the traits of Limnohabitans sp. Jir61 can provide insights into the functional diversity of aquatic microorganisms and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Jir61
StrainLimA-Jir61-C8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Jir61 LimA-Jir61-C8, whole genome shotgun

Gene Summary

Adenine Count

600712 bp

Thymine Count

609020 bp

Guanine Count

709288 bp

Cytosine Count

707770 bp

Genome Length

2626790 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseB9Z35_06735Not AvailableNegative1399985 - 140072226083.8
lysr family transcriptional regulatorB9Z35_06740Not AvailablePositive1400784 - 140190841174.7
sugar transporterB9Z35_06745Not AvailablePositive1402026 - 140256520026.1
c4-dicarboxylate abc transporterB9Z35_06750Not AvailablePositive1402578 - 140409855001.2
hypothetical proteinB9Z35_06755Not AvailablePositive1404171 - 140468619526.4
abc transporter substrate-binding proteinB9Z35_06760Not AvailableNegative1404756 - 140583539425.4
1-deoxy-d-xylulose-5-phosphate synthaseB9Z35_06765Not AvailableNegative1406011 - 140786766455.1
polyprenyl synthetaseB9Z35_06770Not AvailableNegative1407874 - 140879432340.7
exodeoxyribonuclease vii small subunitB9Z35_06775Not AvailableNegative1408803 - 14090488679.32
rieske (2fe-2s) proteinB9Z35_06780Not AvailablePositive1409217 - 141034742860.4

Displaying genes 1341 – 1350 of 2553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.