Limnohabitans sp. JirII-31 LimA-JirII-31-C44

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-31, with the accession number NESA00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic structure, which may be beneficial for efficient replication and adaptability in various environments. As a member of the Limnohabitans genus, this organism is likely involved in aquatic ecosystems, where it may play a role in nutrient cycling and microbial interactions. The single replicon could indicate a potential for rapid growth and response to environmental changes, which is a common trait among freshwater bacteria. The ecological implications of Limnohabitans sp. JirII-31's streamlined genome may include its ability to thrive in diverse aquatic habitats, contributing to the microbial diversity and overall health of these ecosystems. Through its metabolic processes, it may interact with other microorganisms, influencing community dynamics and nutrient availability in its environment. In summary, Limnohabitans sp. JirII-31 possesses a single replicon, which may enhance its adaptability and ecological role in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-31
StrainLimA-JirII-31-C44

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-31 LimA-JirII-31-C44, whole genome shotgun

Gene Summary

Adenine Count

730177 bp

Thymine Count

737717 bp

Guanine Count

1011489 bp

Cytosine Count

999485 bp

Genome Length

3478868 bp

Protein-coding Genes

3274 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-dehydrorhamnose reductaseB9Z41_15965Not AvailableNegative3221649 - 322256332584.9
dtdp-glucose 4,6-dehydrataseB9Z41_15970Not AvailableNegative3222575 - 32227567150.28
hypothetical proteinB9Z41_15980Not AvailablePositive3223872 - 322529653391.1
hypothetical proteinB9Z41_15985Not AvailableNegative3225305 - 322620432556.6
prevent-host-death proteinB9Z41_15990Not AvailablePositive3226383 - 322669111373.5
plasmid stabilization proteinB9Z41_15995Not AvailablePositive3226684 - 322707314695.9
3'-5' exonucleaseB9Z41_16000Not AvailableNegative3227112 - 322770521727.0
ribosome biogenesis gtpase ylqfB9Z41_16005Not AvailableNegative3227702 - 322863433793.9
plasmid stabilization proteinB9Z41_16010Not AvailablePositive3228769 - 32290269414.48
vapc toxin family pin domain ribonucleaseB9Z41_16015Not AvailablePositive3229023 - 322944515170.5

Displaying genes 3121 – 3130 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.