Limnohabitans sp. JirII-31 LimA-JirII-31-C44

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-31, with the accession number NESA00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic structure, which may be beneficial for efficient replication and adaptability in various environments. As a member of the Limnohabitans genus, this organism is likely involved in aquatic ecosystems, where it may play a role in nutrient cycling and microbial interactions. The single replicon could indicate a potential for rapid growth and response to environmental changes, which is a common trait among freshwater bacteria. The ecological implications of Limnohabitans sp. JirII-31's streamlined genome may include its ability to thrive in diverse aquatic habitats, contributing to the microbial diversity and overall health of these ecosystems. Through its metabolic processes, it may interact with other microorganisms, influencing community dynamics and nutrient availability in its environment. In summary, Limnohabitans sp. JirII-31 possesses a single replicon, which may enhance its adaptability and ecological role in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-31
StrainLimA-JirII-31-C44

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-31 LimA-JirII-31-C44, whole genome shotgun

Gene Summary

Adenine Count

730177 bp

Thymine Count

737717 bp

Guanine Count

1011489 bp

Cytosine Count

999485 bp

Genome Length

3478868 bp

Protein-coding Genes

3274 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferaseB9Z41_12420Not AvailableNegative2538334 - 253937437725.8
arginine--trna ligaseB9Z41_12425Not AvailablePositive2539426 - 254113562618.0
sporulation proteinB9Z41_12430Not AvailablePositive2541157 - 254184024143.8
disulfide bond formation protein dsbaB9Z41_12435Not AvailablePositive2541861 - 254250523907.6
lipopolysaccharide transport periplasmic protein lptaB9Z41_12440Not AvailablePositive2542572 - 254312620441.4
lps export abc transporter atp-binding proteinB9Z41_12445Not AvailablePositive2543123 - 254390528470.6
rna polymerase factor sigma-54B9Z41_12450Not AvailablePositive2543928 - 254549057862.6
rna methyltransferaseB9Z41_12455Not AvailablePositive2545550 - 254692350652.3
putative toxin-antitoxin system toxin component, pin familyB9Z41_12460Not AvailablePositive2546920 - 254738116927.8
damage-inducible protein cinaB9Z41_12465Not AvailableNegative2547394 - 254791818500.9

Displaying genes 2451 – 2460 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.