Limnohabitans sp. JirII-31 LimA-JirII-31-C44

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-31, with the accession number NESA00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic structure, which may be beneficial for efficient replication and adaptability in various environments. As a member of the Limnohabitans genus, this organism is likely involved in aquatic ecosystems, where it may play a role in nutrient cycling and microbial interactions. The single replicon could indicate a potential for rapid growth and response to environmental changes, which is a common trait among freshwater bacteria. The ecological implications of Limnohabitans sp. JirII-31's streamlined genome may include its ability to thrive in diverse aquatic habitats, contributing to the microbial diversity and overall health of these ecosystems. Through its metabolic processes, it may interact with other microorganisms, influencing community dynamics and nutrient availability in its environment. In summary, Limnohabitans sp. JirII-31 possesses a single replicon, which may enhance its adaptability and ecological role in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-31
StrainLimA-JirII-31-C44

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-31 LimA-JirII-31-C44, whole genome shotgun

Gene Summary

Adenine Count

730177 bp

Thymine Count

737717 bp

Guanine Count

1011489 bp

Cytosine Count

999485 bp

Genome Length

3478868 bp

Protein-coding Genes

3274 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorB9Z41_11720Not AvailableNegative2394863 - 239545322163.7
hypothetical proteinB9Z41_11725Not AvailablePositive2395604 - 239620922226.5
two-component system response regulatorB9Z41_11730Not AvailableNegative2396228 - 239689023845.9
pas domain-containing sensor histidine kinaseB9Z41_11735Not AvailableNegative2396912 - 239918882596.4
hypothetical proteinB9Z41_11740Not AvailableNegative2399185 - 239968819264.1
16s rrna (cytosine(967)-c(5))-methyltransferaseB9Z41_11745Not AvailableNegative2399798 - 240114148880.6
hypothetical proteinB9Z41_11750Not AvailableNegative2401138 - 240173422193.8
dna-directed rna polymerase subunit beta'B9Z41_11755Not AvailableNegative2401776 - 2405996154415.0
dna-directed rna polymerase subunit betaB9Z41_11760Not AvailableNegative2406024 - 2410136152482.0
50s ribosomal protein l7/l12B9Z41_11765Not AvailableNegative2410400 - 241077412615.2

Displaying genes 2311 – 2320 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.