Limnohabitans sp. JirII-31 LimA-JirII-31-C44

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-31, with the accession number NESA00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic structure, which may be beneficial for efficient replication and adaptability in various environments. As a member of the Limnohabitans genus, this organism is likely involved in aquatic ecosystems, where it may play a role in nutrient cycling and microbial interactions. The single replicon could indicate a potential for rapid growth and response to environmental changes, which is a common trait among freshwater bacteria. The ecological implications of Limnohabitans sp. JirII-31's streamlined genome may include its ability to thrive in diverse aquatic habitats, contributing to the microbial diversity and overall health of these ecosystems. Through its metabolic processes, it may interact with other microorganisms, influencing community dynamics and nutrient availability in its environment. In summary, Limnohabitans sp. JirII-31 possesses a single replicon, which may enhance its adaptability and ecological role in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-31
StrainLimA-JirII-31-C44

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-31 LimA-JirII-31-C44, whole genome shotgun

Gene Summary

Adenine Count

730177 bp

Thymine Count

737717 bp

Guanine Count

1011489 bp

Cytosine Count

999485 bp

Genome Length

3478868 bp

Protein-coding Genes

3274 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxyphenylacetate 2,3-dioxygenaseB9Z41_08565Not AvailableNegative1753755 - 175467833603.9
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseB9Z41_08570Not AvailableNegative1754678 - 175615052638.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseB9Z41_08575Not AvailableNegative1756173 - 175695228785.2
hypothetical proteinB9Z41_08580Not AvailableNegative1756949 - 175763824357.7
homoprotocatechuate degradation operon regulator hparB9Z41_08585Not AvailableNegative1757673 - 175812816998.5
dna repair protein radaB9Z41_08590Not AvailablePositive1758266 - 175964548284.7
glycerate kinaseB9Z41_08595Not AvailablePositive1759734 - 176018916787.5
branched chain amino acid aminotransferaseB9Z41_08600Not AvailablePositive1760280 - 176123035247.1
hypothetical proteinB9Z41_08605Not AvailablePositive1761249 - 17614527244.76
lipopolysaccharide heptosyltransferase iiB9Z41_08610Not AvailablePositive1761364 - 176249440769.7

Displaying genes 1721 – 1730 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.