Limnohabitans sp. JirII-31 LimA-JirII-31-C44

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-31, with the accession number NESA00000000.1, is characterized by having a single replicon. This trait suggests a streamlined genomic structure, which may be beneficial for efficient replication and adaptability in various environments. As a member of the Limnohabitans genus, this organism is likely involved in aquatic ecosystems, where it may play a role in nutrient cycling and microbial interactions. The single replicon could indicate a potential for rapid growth and response to environmental changes, which is a common trait among freshwater bacteria. The ecological implications of Limnohabitans sp. JirII-31's streamlined genome may include its ability to thrive in diverse aquatic habitats, contributing to the microbial diversity and overall health of these ecosystems. Through its metabolic processes, it may interact with other microorganisms, influencing community dynamics and nutrient availability in its environment. In summary, Limnohabitans sp. JirII-31 possesses a single replicon, which may enhance its adaptability and ecological role in freshwater systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-31
StrainLimA-JirII-31-C44

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-31 LimA-JirII-31-C44, whole genome shotgun

Gene Summary

Adenine Count

730177 bp

Thymine Count

737717 bp

Guanine Count

1011489 bp

Cytosine Count

999485 bp

Genome Length

3478868 bp

Protein-coding Genes

3274 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
biotin--[acetyl-coa-carboxylase] ligaseB9Z41_08015Not AvailableNegative1621089 - 162188328373.1
set domain-containing protein-lysine n-methyltransferaseB9Z41_08020Not AvailableNegative1621887 - 162241719920.7
dna topoisomerase iiiB9Z41_08025Not AvailablePositive1622534 - 1625476108237.0
homoserine o-acetyltransferaseB9Z41_08030Not AvailablePositive1625503 - 162668143148.7
methionine biosynthesis protein metwB9Z41_08035Not AvailablePositive1626678 - 162727121764.2
peptidase m20B9Z41_08040Not AvailablePositive1627331 - 162880052430.6
16s rrna (uracil(1498)-n(3))-methyltransferaseB9Z41_08045Not AvailableNegative1628787 - 162953326586.1
aminoglycoside phosphotransferaseB9Z41_08050Not AvailableNegative1629536 - 163066942590.0
lps biosynthesis proteinB9Z41_08055Not AvailablePositive1630760 - 163321391022.8
hypothetical proteinB9Z41_08060Not AvailablePositive1633213 - 163449646988.3

Displaying genes 1611 – 1620 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.