Limnohabitans sp. T6-20 LimC-T6-20-C3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. T6-20, also designated as LimC-T6-20-C3, is a freshwater bacterium characterized by a single replicon. The genome of this organism is documented under the accession number NERW00000000.1. This species is part of the Limnohabitans genus, which is known for its ecological role in aquatic environments. The presence of a single replicon indicates a streamlined genomic structure, which can be advantageous for adaptation and survival in freshwater ecosystems. This feature may contribute to the organism's metabolic efficiency and its ability to thrive in varying environmental conditions. While the specific ecological interactions and functional roles of Limnohabitans sp. T6-20 are not detailed in the provided information, members of the Limnohabitans genus are generally known to play significant roles in nutrient cycling and microbial community dynamics in freshwater habitats. Their presence can influence the availability of nutrients and the overall health of aquatic ecosystems. In conclusion, Limnohabitans sp. T6-20 exhibits a simple genomic architecture with a single replicon, which may facilitate its adaptation in freshwater environments. The ecological significance of this bacterium likely revolves around its contributions to nutrient cycling and the maintenance of microbial diversity in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. T6-20
StrainLimC-T6-20-C3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. T6-20 LimC-T6-20-C3, whole genome shotgun

Gene Summary

Adenine Count

685610 bp

Thymine Count

680598 bp

Guanine Count

1008687 bp

Cytosine Count

1008695 bp

Genome Length

3383590 bp

Protein-coding Genes

2999 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-methyltetrahydrofolate--homocysteine methyltransferaseB9Z33_03785Not AvailablePositive803793 - 80483937517.8
carnitine dehydrataseB9Z33_03790Not AvailablePositive805038 - 80612338724.6
enoyl-coa hydrataseB9Z33_03795Not AvailablePositive806135 - 80692628542.9
short-chain dehydrogenaseB9Z33_03800Not AvailablePositive806944 - 80783431548.8
helix-turn-helix transcriptional regulatorB9Z33_03805Not AvailableNegative807849 - 81053699336.2
fatty acid oxidation complex subunit alpha fadbB9Z33_03810Not AvailablePositive810744 - 81289776360.4
3-hydroxy-2-methylbutyryl-coa dehydrogenaseB9Z33_03815Not AvailablePositive812916 - 81369827160.7
acetyl-coa acetyltransferaseB9Z33_03820Not AvailablePositive813817 - 81499541136.6
high-affinity branched-chain amino acid abc transporter atp-binding protein livgB9Z33_03825Not AvailablePositive814995 - 81579528806.8
abc transporter atp-binding proteinB9Z33_03830Not AvailablePositive815878 - 81659425847.2

Displaying genes 751 – 760 of 3049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.