Limnohabitans sp. T6-5 LimC-T6-5-C7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. T6-5, designated as LimC-T6-5-C7, is characterized by having a single replicon, which indicates a streamlined genomic organization. This trait can be significant for understanding its replication and stability under various environmental conditions. The organism is cataloged under the accession number NERV00000000.1, allowing for reference and retrieval of its genomic information. The presence of a single replicon may suggest a level of efficiency in its genetic processes, potentially impacting its adaptability and survival in aquatic environments. Limnohabitans species are known for their role in freshwater ecosystems, where they contribute to nutrient cycling and organic matter decomposition. Given its classification within the Limnohabitans genus, Limnohabitans sp. T6-5 likely shares ecological traits with other members of the group, such as the ability to thrive in oligotrophic or eutrophic waters. The streamlined genomic structure could facilitate rapid adaptation to changing environmental conditions, which is essential for survival in dynamic freshwater habitats. In summary, Limnohabitans sp. T6-5's single replicon and its classification under accession number NERV00000000.1 provide valuable insights into its genomic efficiency and potential ecological roles in freshwater ecosystems, particularly in nutrient cycling and organic matter breakdown. Understanding these traits is crucial for appreciating the organism's importance in maintaining the health and stability of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. T6-5
StrainLimC-T6-5-C7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. T6-5 LimC-T6-5-C7, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid maintenance protein ccdbB9Z51_13955Not AvailablePositive3173796 - 317411011578.1
excinuclease abc subunit bB9Z51_13960Not AvailablePositive3174153 - 317626479618.0
fe-s cluster assembly transcriptional regulator iscrB9Z51_13965Not AvailablePositive3176508 - 317704419320.5
iscs subfamily cysteine desulfuraseB9Z51_13970Not AvailablePositive3177067 - 317828744540.6
iron-sulfur cluster scaffold-like proteinB9Z51_13975Not AvailablePositive3178364 - 317875013697.3
iron-sulfur cluster assembly protein iscaB9Z51_13980Not AvailablePositive3178752 - 317907511637.8
fe-s protein assembly co-chaperone hscbB9Z51_13985Not AvailablePositive3179088 - 317960619445.1
fe-s protein assembly chaperone hscaB9Z51_13990Not AvailablePositive3179665 - 318153065608.0
isc system 2fe-2s type ferredoxinB9Z51_13995Not AvailablePositive3181565 - 318190312428.8
dna polymerase iii subunit epsilonB9Z51_14000Not AvailablePositive3181917 - 318263026247.1

Displaying genes 2761 – 2770 of 3564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.