Limnohabitans sp. T6-5 LimC-T6-5-C7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. T6-5, designated as LimC-T6-5-C7, is characterized by having a single replicon, which indicates a streamlined genomic organization. This trait can be significant for understanding its replication and stability under various environmental conditions. The organism is cataloged under the accession number NERV00000000.1, allowing for reference and retrieval of its genomic information. The presence of a single replicon may suggest a level of efficiency in its genetic processes, potentially impacting its adaptability and survival in aquatic environments. Limnohabitans species are known for their role in freshwater ecosystems, where they contribute to nutrient cycling and organic matter decomposition. Given its classification within the Limnohabitans genus, Limnohabitans sp. T6-5 likely shares ecological traits with other members of the group, such as the ability to thrive in oligotrophic or eutrophic waters. The streamlined genomic structure could facilitate rapid adaptation to changing environmental conditions, which is essential for survival in dynamic freshwater habitats. In summary, Limnohabitans sp. T6-5's single replicon and its classification under accession number NERV00000000.1 provide valuable insights into its genomic efficiency and potential ecological roles in freshwater ecosystems, particularly in nutrient cycling and organic matter breakdown. Understanding these traits is crucial for appreciating the organism's importance in maintaining the health and stability of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. T6-5
StrainLimC-T6-5-C7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. T6-5 LimC-T6-5-C7, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxyphenylacetate 2,3-dioxygenaseB9Z51_11495Not AvailableNegative2594032 - 259495833940.4
dna-binding proteinB9Z51_11500Not AvailableNegative2594987 - 259538214420.5
hypothetical proteinB9Z51_11505Not AvailableNegative2595379 - 259565410239.2
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseB9Z51_11510Not AvailableNegative2595724 - 259719352648.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseB9Z51_11515Not AvailableNegative2597304 - 259806827919.5
fumarylacetoacetate hydrolaseB9Z51_11520Not AvailableNegative2598065 - 259870023125.6
homoprotocatechuate degradation operon regulator hparB9Z51_11525Not AvailableNegative2598705 - 259918717933.3
hypothetical proteinB9Z51_11530Not AvailablePositive2599410 - 260208897497.6
rna-binding proteinB9Z51_11535Not AvailableNegative2602155 - 260245410559.4
dna repair protein radaB9Z51_11540Not AvailablePositive2602706 - 260409749154.6

Displaying genes 2271 – 2280 of 3564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.