Limnohabitans sp. T6-5 LimC-T6-5-C7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. T6-5, designated as LimC-T6-5-C7, is characterized by having a single replicon, which indicates a streamlined genomic organization. This trait can be significant for understanding its replication and stability under various environmental conditions. The organism is cataloged under the accession number NERV00000000.1, allowing for reference and retrieval of its genomic information. The presence of a single replicon may suggest a level of efficiency in its genetic processes, potentially impacting its adaptability and survival in aquatic environments. Limnohabitans species are known for their role in freshwater ecosystems, where they contribute to nutrient cycling and organic matter decomposition. Given its classification within the Limnohabitans genus, Limnohabitans sp. T6-5 likely shares ecological traits with other members of the group, such as the ability to thrive in oligotrophic or eutrophic waters. The streamlined genomic structure could facilitate rapid adaptation to changing environmental conditions, which is essential for survival in dynamic freshwater habitats. In summary, Limnohabitans sp. T6-5's single replicon and its classification under accession number NERV00000000.1 provide valuable insights into its genomic efficiency and potential ecological roles in freshwater ecosystems, particularly in nutrient cycling and organic matter breakdown. Understanding these traits is crucial for appreciating the organism's importance in maintaining the health and stability of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. T6-5
StrainLimC-T6-5-C7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. T6-5 LimC-T6-5-C7, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease adapter clpsB9Z51_06180Not AvailablePositive1463555 - 146391413098.8
atp-dependent clp protease atp-binding subunit clpaB9Z51_06185Not AvailablePositive1463970 - 146630985304.5
atp-binding proteinB9Z51_06190Not AvailableNegative1466397 - 146792354017.6
yebc/pmpr family dna-binding transcriptional regulatorB9Z51_06195Not AvailablePositive1467994 - 146871926136.9
phosphoribosylamine--glycine ligaseB9Z51_06200Not AvailablePositive1468729 - 147000945726.3
hypothetical proteinB9Z51_06205Not AvailablePositive1470075 - 147068022850.7
coproporphyrinogen iii oxidaseB9Z51_06210Not AvailablePositive1470677 - 147159734549.8
nicotinate (nicotinamide) nucleotide adenylyltransferaseB9Z51_06215Not AvailablePositive1471588 - 147222923314.9
ribosome silencing factorB9Z51_06220Not AvailablePositive1472226 - 147295725525.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhB9Z51_06225Not AvailablePositive1472964 - 147343117475.2

Displaying genes 1281 – 1290 of 3564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.