Limnohabitans sp. WS1 LimC-WS1-C48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. WS1 LimC-WS1-C48 is a freshwater bacterium characterized by its single replicon structure, which is indicative of a streamlined genome organization. The organism has been cataloged under the accession number NERU00000000.1, providing a reference for further genomic and taxonomic studies. This bacterium is part of the Limnohabitans genus, which is known for its adaptation to freshwater environments. Members of this genus are typically involved in the biogeochemical cycling of nutrients in aquatic ecosystems, contributing to the overall health and function of these environments. The single replicon trait suggests a possible efficiency in replication and gene regulation, which may allow Limnohabitans sp. WS1 LimC-WS1-C48 to thrive in variable freshwater conditions. The ecological implications of Limnohabitans sp. WS1 LimC-WS1-C48's traits suggest that it could play a significant role in nutrient cycling, potentially influencing the dynamics of microbial communities in freshwater habitats. Understanding the genetic and functional traits of this bacterium could provide insights into its ecological roles and interactions with other microorganisms, thereby enhancing our knowledge of freshwater ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. WS1
StrainLimC-WS1-C48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. WS1 LimC-WS1-C48, whole genome shotgun sequence.

Gene Summary

Adenine Count

941388 bp

Thymine Count

938397 bp

Guanine Count

1365527 bp

Cytosine Count

1358829 bp

Genome Length

4604141 bp

Protein-coding Genes

4091 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna repair protein radaB9Z48_20085Not AvailableNegative4328506 - 432988248332.7
2-nitropropane dioxygenaseB9Z48_20090Not AvailableNegative4329927 - 433104839026.7
hypothetical proteinB9Z48_20095Not AvailableNegative4331096 - 433378698012.9
homoprotocatechuate degradation operon regulator hparB9Z48_20100Not AvailablePositive4334015 - 433450318184.8
fumarylacetoacetate hydrolaseB9Z48_20105Not AvailablePositive4334500 - 433513222941.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseB9Z48_20110Not AvailablePositive4335129 - 433589327809.4
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseB9Z48_20115Not AvailablePositive4336005 - 433747452576.8
hypothetical proteinB9Z48_20120Not AvailablePositive4337544 - 433781910156.0
dna-binding proteinB9Z48_20125Not AvailablePositive4337816 - 433821114739.6
3,4-dihydroxyphenylacetate 2,3-dioxygenaseB9Z48_20130Not AvailablePositive4338246 - 433917233838.1

Displaying genes 3921 – 3930 of 4172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.