Limnohabitans sp. WS1 LimC-WS1-C48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. WS1 LimC-WS1-C48 is a freshwater bacterium characterized by its single replicon structure, which is indicative of a streamlined genome organization. The organism has been cataloged under the accession number NERU00000000.1, providing a reference for further genomic and taxonomic studies. This bacterium is part of the Limnohabitans genus, which is known for its adaptation to freshwater environments. Members of this genus are typically involved in the biogeochemical cycling of nutrients in aquatic ecosystems, contributing to the overall health and function of these environments. The single replicon trait suggests a possible efficiency in replication and gene regulation, which may allow Limnohabitans sp. WS1 LimC-WS1-C48 to thrive in variable freshwater conditions. The ecological implications of Limnohabitans sp. WS1 LimC-WS1-C48's traits suggest that it could play a significant role in nutrient cycling, potentially influencing the dynamics of microbial communities in freshwater habitats. Understanding the genetic and functional traits of this bacterium could provide insights into its ecological roles and interactions with other microorganisms, thereby enhancing our knowledge of freshwater ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. WS1
StrainLimC-WS1-C48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. WS1 LimC-WS1-C48, whole genome shotgun sequence.

Gene Summary

Adenine Count

941388 bp

Thymine Count

938397 bp

Guanine Count

1365527 bp

Cytosine Count

1358829 bp

Genome Length

4604141 bp

Protein-coding Genes

4091 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-quinone oxidoreductaseB9Z48_19680Not AvailableNegative4253681 - 425469134502.7
polyribonucleotide nucleotidyltransferaseB9Z48_19685Not AvailableNegative4254816 - 425692176062.9
30s ribosomal protein s15B9Z48_19690Not AvailableNegative4257140 - 42574069887.16
aspartate aminotransferaseB9Z48_19695Not AvailableNegative4257707 - 425889142527.2
hypothetical proteinB9Z48_19700Not AvailablePositive4258957 - 425926510800.1
exodeoxyribonuclease v subunit alphaB9Z48_19705Not AvailableNegative4259262 - 426136774501.8
exodeoxyribonuclease v subunit betaB9Z48_19710Not AvailableNegative4261415 - 4265221139843.0
exodeoxyribonuclease v subunit gammaB9Z48_19715Not AvailableNegative4265218 - 4268835133214.0
copg family transcriptional regulatorB9Z48_19720Not AvailablePositive4269164 - 42693948441.81
vapc toxin family pin domain ribonucleaseB9Z48_19725Not AvailablePositive4269404 - 426980815000.3

Displaying genes 3841 – 3850 of 4172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.