Limnohabitans sp. WS1 LimC-WS1-C48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. WS1 LimC-WS1-C48 is a freshwater bacterium characterized by its single replicon structure, which is indicative of a streamlined genome organization. The organism has been cataloged under the accession number NERU00000000.1, providing a reference for further genomic and taxonomic studies. This bacterium is part of the Limnohabitans genus, which is known for its adaptation to freshwater environments. Members of this genus are typically involved in the biogeochemical cycling of nutrients in aquatic ecosystems, contributing to the overall health and function of these environments. The single replicon trait suggests a possible efficiency in replication and gene regulation, which may allow Limnohabitans sp. WS1 LimC-WS1-C48 to thrive in variable freshwater conditions. The ecological implications of Limnohabitans sp. WS1 LimC-WS1-C48's traits suggest that it could play a significant role in nutrient cycling, potentially influencing the dynamics of microbial communities in freshwater habitats. Understanding the genetic and functional traits of this bacterium could provide insights into its ecological roles and interactions with other microorganisms, thereby enhancing our knowledge of freshwater ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. WS1
StrainLimC-WS1-C48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. WS1 LimC-WS1-C48, whole genome shotgun sequence.

Gene Summary

Adenine Count

941388 bp

Thymine Count

938397 bp

Guanine Count

1365527 bp

Cytosine Count

1358829 bp

Genome Length

4604141 bp

Protein-coding Genes

4091 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB9Z48_07420Not AvailableNegative1605296 - 160556510444.6
dihydrolipoamide succinyltransferaseB9Z48_07425Not AvailableNegative1605580 - 160683343428.9
2-oxoglutarate dehydrogenase e1 componentB9Z48_07430Not AvailableNegative1606903 - 1609770105764.0
hypothetical proteinB9Z48_07440Not AvailableNegative1612108 - 16123117225.69
isochorismataseB9Z48_07445Not AvailableNegative1612470 - 161307522335.7
glycoside hydrolaseB9Z48_07450Not AvailablePositive1613199 - 161374720224.3
hypothetical proteinB9Z48_07455Not AvailablePositive1613744 - 161445125795.9
30s ribosomal protein s12 methylthiotransferase accessory protein ycaoB9Z48_07460Not AvailableNegative1614455 - 161624565571.9
mfs transporterB9Z48_07465Not AvailableNegative1616276 - 161746641439.7
abc transporter substrate-binding proteinB9Z48_07470Not AvailablePositive1617660 - 161868536220.2

Displaying genes 1471 – 1480 of 4172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.