Limnohabitans sp. WS1 LimC-WS1-C48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. WS1 LimC-WS1-C48 is a freshwater bacterium characterized by its single replicon structure, which is indicative of a streamlined genome organization. The organism has been cataloged under the accession number NERU00000000.1, providing a reference for further genomic and taxonomic studies. This bacterium is part of the Limnohabitans genus, which is known for its adaptation to freshwater environments. Members of this genus are typically involved in the biogeochemical cycling of nutrients in aquatic ecosystems, contributing to the overall health and function of these environments. The single replicon trait suggests a possible efficiency in replication and gene regulation, which may allow Limnohabitans sp. WS1 LimC-WS1-C48 to thrive in variable freshwater conditions. The ecological implications of Limnohabitans sp. WS1 LimC-WS1-C48's traits suggest that it could play a significant role in nutrient cycling, potentially influencing the dynamics of microbial communities in freshwater habitats. Understanding the genetic and functional traits of this bacterium could provide insights into its ecological roles and interactions with other microorganisms, thereby enhancing our knowledge of freshwater ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. WS1
StrainLimC-WS1-C48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. WS1 LimC-WS1-C48, whole genome shotgun sequence.

Gene Summary

Adenine Count

941388 bp

Thymine Count

938397 bp

Guanine Count

1365527 bp

Cytosine Count

1358829 bp

Genome Length

4604141 bp

Protein-coding Genes

4091 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid maintenance protein ccdbB9Z48_07070Not AvailablePositive1489783 - 149010011381.9
arsr family transcriptional regulatorB9Z48_07075Not AvailablePositive1490283 - 149087922869.5
cytochrome ubiquinol oxidase subunit iB9Z48_07080Not AvailablePositive1490898 - 149226250368.0
cytochrome bd ubiquinol oxidase subunit iiB9Z48_07085Not AvailablePositive1492308 - 149330636251.6
exopolysaccharide biosynthesis protein exodB9Z48_07090Not AvailableNegative1493391 - 149394219639.1
diacylglycerol kinaseB9Z48_07095Not AvailablePositive1494349 - 149538036503.5
dna repair exonucleaseB9Z48_07100Not AvailablePositive1495377 - 149622230013.1
mechanosensitive ion channel protein mscsB9Z48_07105Not AvailableNegative1496245 - 149710231735.8
hypothetical proteinB9Z48_07110Not AvailableNegative1497102 - 149758416527.3
hypothetical proteinB9Z48_07115Not AvailablePositive1497852 - 149882034817.9

Displaying genes 1401 – 1410 of 4172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.