Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain OLC1000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1309692 bp
Thymine Count
1317008 bp
Guanine Count
1348180 bp
Cytosine Count
1316072 bp
Genome Length
5290952 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase nitrate-inducible cytochrome b556(fdn) subunit | AW059_05510 | Not Available | Negative | 1108901 - 1109554 | 25370.0 |
| formate dehydrogenase subunit beta | AW059_05515 | Not Available | Negative | 1109547 - 1110431 | 32268.5 |
| formate dehydrogenase-n subunit alpha | AW059_05520 | Not Available | Negative | 1110444 - 1113491 | 112779.0 |
| eama family transporter | AW059_05525 | Not Available | Positive | 1113723 - 1114604 | 31546.3 |
| phosphoporin phoe | AW059_05530 | Not Available | Positive | 1114863 - 1115963 | 40984.4 |
| leucine rich repeat family protein | AW059_05540 | Not Available | Positive | 1116724 - 1117392 | 25185.4 |
| hypothetical protein | AW059_05545 | Not Available | Positive | 1117455 - 1118711 | 48110.1 |
| nark family nitrate/nitrite mfs transporter | AW059_05550 | Not Available | Positive | 1119032 - 1120420 | 49954.1 |
| nitrate reductase subunit alpha | AW059_05555 | Not Available | Positive | 1120515 - 1124255 | 140222.0 |
| nitrate reductase subunit beta | AW059_05560 | Not Available | Positive | 1124252 - 1125796 | 58533.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





