Pluralibacter gergoviae strain 40874

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Pluralibacter

Description

Pluralibacter gergoviae strain 40874 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which may influence its genetic stability and replication efficiency. This strain has been identified in association with amphibians, specifically the genus Gastrotheca. The significance of the association between Pluralibacter gergoviae strain 40874 and amphibians could be related to the ecological roles that bacteria play in the environments inhabited by these hosts. Bacteria can influence host health, nutrient cycling, and even the immune responses of their amphibian hosts. The presence of this specific strain in Gastrotheca may indicate its potential role in the microbiome of these amphibians, contributing to their overall health and ecological interactions within their habitat. The genomic information accessible under accession number NDFB00000000.1 provides a basis for further research into the functional capabilities of this strain and its interactions with amphibian hosts. Understanding such relationships is crucial, especially considering the global decline of amphibian populations, which may be affected by microbial dynamics in their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPluralibacter
SpeciesPluralibacter gergoviae
Strainstrain 40874

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pluralibacter gergoviae strain 40874
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Amphibia, Gastrotheca
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pluralibacter gergoviae strain 40874 40874_NODE_10.ctg_1, whole

Gene Summary

Adenine Count

1136692 bp

Thymine Count

1133587 bp

Guanine Count

1639905 bp

Cytosine Count

1629726 bp

Genome Length

5539910 bp

Protein-coding Genes

4962 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched chain amino acid abc transporter substrate-binding proteinB5M10_04695Not AvailableNegative987203 - 98831539298.9
amino acid permeaseB5M10_04700Not AvailableNegative988516 - 98976044683.8
aspartate aminotransferase family proteinB5M10_04705Not AvailableNegative989871 - 99113644985.2
decarboxylaseB5M10_04710Not AvailablePositive991253 - 99273154482.8
rna polymerase factor sigma-32B5M10_04715Not AvailableNegative992766 - 99362032472.7
cell division protein ftsxB5M10_04720Not AvailableNegative993881 - 99493638632.1
cell division atp-binding protein ftseB5M10_04725Not AvailableNegative994929 - 99559424335.7
signal recognition particle-docking protein ftsyB5M10_04730Not AvailableNegative995597 - 99703651933.2
16s rrna (guanine(966)-n(2))-methyltransferaseB5M10_04735Not AvailablePositive997180 - 99777621715.9
hypothetical proteinB5M10_04740Not AvailablePositive997766 - 99804110551.8

Displaying genes 961 – 970 of 5127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.