Idiomarina sp. 34-48-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. 34-48-12 is a marine bacterium characterized by the presence of flagella, which suggests it has the ability to move in aquatic environments. This motility may provide advantages in nutrient acquisition or evasion of unfavorable conditions. The organism has a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in resource utilization. The genetic material of Idiomarina sp. 34-48-12 is cataloged under the accession NCJS00000000.1, providing a reference for further genomic studies and comparisons with related species. Understanding the genomic features of this strain can offer insights into its metabolic capabilities and ecological roles within marine ecosystems. The presence of flagella and the single replicon may influence the ecological strategies employed by Idiomarina sp. 34-48-12. These traits suggest that it could be well-suited for dynamic marine environments, where motility is crucial for survival and competition with other microorganisms. As a member of the Idiomarina genus, this bacterium may play a role in biogeochemical cycles, contributing to the degradation of organic matter and nutrient cycling in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. 34-48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina sp. 34-48-12


Gene Summary

Adenine Count

551312 bp

Thymine Count

552158 bp

Guanine Count

500275 bp

Cytosine Count

498722 bp

Genome Length

2102884 bp

Protein-coding Genes

2077 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase factor sigma-54B7X54_00290Not AvailableNegative61718 - 6309151439.1
lps export abc transporter atp-binding proteinB7X54_00295Not AvailableNegative63100 - 6382526707.3
lipopolysaccharide transport periplasmic protein lptaB7X54_00300Not AvailableNegative63806 - 6433919672.0
lps export abc transporter periplasmic protein lptcB7X54_00305Not AvailableNegative64296 - 6487121419.7
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseB7X54_00310Not AvailableNegative64868 - 6542220010.9
d-arabinose 5-phosphate isomeraseB7X54_00315Not AvailableNegative65422 - 6640234440.9
phospholipid abc transporter atp-binding protein mlafB7X54_00320Not AvailablePositive66591 - 6745431165.6
abc transporter permeaseB7X54_00325Not AvailablePositive67444 - 6822027480.4
outer membrane lipid asymmetry maintenance protein mladB7X54_00330Not AvailablePositive68226 - 6869316795.1
organic solvent abc transporterB7X54_00335Not AvailablePositive68703 - 6936825434.3

Displaying genes 61 – 70 of 2122 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.