Idiomarina sp. 34-48-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. 34-48-12 is a marine bacterium characterized by the presence of flagella, which suggests it has the ability to move in aquatic environments. This motility may provide advantages in nutrient acquisition or evasion of unfavorable conditions. The organism has a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in resource utilization. The genetic material of Idiomarina sp. 34-48-12 is cataloged under the accession NCJS00000000.1, providing a reference for further genomic studies and comparisons with related species. Understanding the genomic features of this strain can offer insights into its metabolic capabilities and ecological roles within marine ecosystems. The presence of flagella and the single replicon may influence the ecological strategies employed by Idiomarina sp. 34-48-12. These traits suggest that it could be well-suited for dynamic marine environments, where motility is crucial for survival and competition with other microorganisms. As a member of the Idiomarina genus, this bacterium may play a role in biogeochemical cycles, contributing to the degradation of organic matter and nutrient cycling in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. 34-48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Idiomarina sp. 34-48-12 04302015_34_scaffold_27776, whole

Gene Summary

Adenine Count

551312 bp

Thymine Count

552158 bp

Guanine Count

500275 bp

Cytosine Count

498722 bp

Genome Length

2102884 bp

Protein-coding Genes

2077 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna pseudouridine synthaseB7X54_09230Not AvailableNegative1822533 - 182318924522.7
hypothetical proteinB7X54_09235Not AvailableNegative1823186 - 182372920499.8
bifunctional metallophosphatase/5'-nucleotidaseB7X54_09240Not AvailablePositive1823730 - 182428720013.2
bcr/cfla family drug resistance efflux transporterB7X54_09245Not AvailablePositive1824284 - 182546542394.7
aminobenzoyl-glutamate transporterB7X54_09250Not AvailableNegative1825597 - 182715655627.3
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseB7X54_09255Not AvailablePositive1827287 - 182817132253.2
cell division protein ftswB7X54_09260Not AvailablePositive1828152 - 182943847095.0
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseB7X54_09265Not AvailablePositive1829435 - 183054139495.8
hypothetical proteinB7X54_09270Not AvailablePositive1830538 - 18307858781.62
succinyl-diaminopimelate desuccinylaseB7X54_09275Not AvailableNegative1830786 - 183192640903.2

Displaying genes 1811 – 1820 of 2122 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.