Idiomarina sp. 34-48-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. 34-48-12 is a marine bacterium characterized by the presence of flagella, which suggests it has the ability to move in aquatic environments. This motility may provide advantages in nutrient acquisition or evasion of unfavorable conditions. The organism has a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in resource utilization. The genetic material of Idiomarina sp. 34-48-12 is cataloged under the accession NCJS00000000.1, providing a reference for further genomic studies and comparisons with related species. Understanding the genomic features of this strain can offer insights into its metabolic capabilities and ecological roles within marine ecosystems. The presence of flagella and the single replicon may influence the ecological strategies employed by Idiomarina sp. 34-48-12. These traits suggest that it could be well-suited for dynamic marine environments, where motility is crucial for survival and competition with other microorganisms. As a member of the Idiomarina genus, this bacterium may play a role in biogeochemical cycles, contributing to the degradation of organic matter and nutrient cycling in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. 34-48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Idiomarina sp. 34-48-12 04302015_34_scaffold_27776, whole

Gene Summary

Adenine Count

551312 bp

Thymine Count

552158 bp

Guanine Count

500275 bp

Cytosine Count

498722 bp

Genome Length

2102884 bp

Protein-coding Genes

2077 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate synthaseB7X54_08900Not AvailableNegative1761186 - 176302766698.2
sodium:proline symporterB7X54_08905Not AvailablePositive1763035 - 1766391124307.0
dna-binding response regulatorB7X54_08910Not AvailableNegative1766369 - 176703124498.7
nucleoside-diphosphate kinaseB7X54_08915Not AvailablePositive1767227 - 176765815813.8
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnB7X54_08920Not AvailablePositive1767765 - 176889842302.2
type iv pilus biogenesis/stability protein pilwB7X54_08925Not AvailablePositive1769018 - 176978529058.3
hypothetical proteinB7X54_08930Not AvailablePositive1769795 - 177084738862.0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseB7X54_08935Not AvailablePositive1770952 - 177135814670.8
trna guanosine(34) transglycosylase tgtB7X54_08940Not AvailablePositive1771381 - 177234035574.6
hypothetical proteinB7X54_08945Not AvailableNegative1772333 - 177296222426.4

Displaying genes 1751 – 1760 of 2122 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.