Idiomarina sp. 34-48-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. 34-48-12 is a marine bacterium characterized by the presence of flagella, which suggests it has the ability to move in aquatic environments. This motility may provide advantages in nutrient acquisition or evasion of unfavorable conditions. The organism has a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in resource utilization. The genetic material of Idiomarina sp. 34-48-12 is cataloged under the accession NCJS00000000.1, providing a reference for further genomic studies and comparisons with related species. Understanding the genomic features of this strain can offer insights into its metabolic capabilities and ecological roles within marine ecosystems. The presence of flagella and the single replicon may influence the ecological strategies employed by Idiomarina sp. 34-48-12. These traits suggest that it could be well-suited for dynamic marine environments, where motility is crucial for survival and competition with other microorganisms. As a member of the Idiomarina genus, this bacterium may play a role in biogeochemical cycles, contributing to the degradation of organic matter and nutrient cycling in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. 34-48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Idiomarina sp. 34-48-12 04302015_34_scaffold_27776, whole

Gene Summary

Adenine Count

551312 bp

Thymine Count

552158 bp

Guanine Count

500275 bp

Cytosine Count

498722 bp

Genome Length

2102884 bp

Protein-coding Genes

2077 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate--l-alanine ligaseB7X54_07975Not AvailableNegative1587050 - 158790731122.9
anhydro-n-acetylmuramic acid kinaseB7X54_07980Not AvailableNegative1587908 - 158884234279.5
peptidase m23B7X54_07985Not AvailableNegative1588842 - 159014948722.9
tyrosine--trna ligaseB7X54_07990Not AvailablePositive1590340 - 159154244359.6
bis(5'-nucleosyl)-tetraphosphatase (symmetrical)B7X54_07995Not AvailableNegative1591539 - 159236631491.7
co2+/mg2+ efflux protein apagB7X54_08000Not AvailableNegative1592369 - 159274313665.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseB7X54_08005Not AvailableNegative1592730 - 159353930345.6
4-hydroxythreonine-4-phosphate dehydrogenase pdxaB7X54_08010Not AvailableNegative1593536 - 159402317454.9
msha biogenesis protein mshgB7X54_08015Not AvailablePositive1594079 - 159530245388.9
pili assembly chaperoneB7X54_08020Not AvailablePositive1595390 - 159600121157.9

Displaying genes 1571 – 1580 of 2122 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.