Idiomarina sp. 34-48-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. 34-48-12 is a marine bacterium characterized by the presence of flagella, which suggests it has the ability to move in aquatic environments. This motility may provide advantages in nutrient acquisition or evasion of unfavorable conditions. The organism has a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in resource utilization. The genetic material of Idiomarina sp. 34-48-12 is cataloged under the accession NCJS00000000.1, providing a reference for further genomic studies and comparisons with related species. Understanding the genomic features of this strain can offer insights into its metabolic capabilities and ecological roles within marine ecosystems. The presence of flagella and the single replicon may influence the ecological strategies employed by Idiomarina sp. 34-48-12. These traits suggest that it could be well-suited for dynamic marine environments, where motility is crucial for survival and competition with other microorganisms. As a member of the Idiomarina genus, this bacterium may play a role in biogeochemical cycles, contributing to the degradation of organic matter and nutrient cycling in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. 34-48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Idiomarina sp. 34-48-12 04302015_34_scaffold_27776, whole

Gene Summary

Adenine Count

551312 bp

Thymine Count

552158 bp

Guanine Count

500275 bp

Cytosine Count

498722 bp

Genome Length

2102884 bp

Protein-coding Genes

2077 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB7X54_00710Not AvailablePositive139640 - 14032025331.3
peroxiredoxinB7X54_00715Not AvailablePositive140313 - 14079517119.4
hypothetical proteinB7X54_00720Not AvailablePositive140800 - 14199043686.2
structural protein mipaB7X54_00725Not AvailablePositive142119 - 14280825216.9
atp-dependent rna helicase dbpaB7X54_00730Not AvailableNegative142874 - 14316510562.9
trna pseudouridine(65) synthase trucB7X54_00735Not AvailablePositive143284 - 14400927764.2
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseB7X54_00740Not AvailableNegative144006 - 14483029778.8
[protein-pii] uridylyltransferaseB7X54_00745Not AvailableNegative144876 - 14747999636.7
type i methionyl aminopeptidaseB7X54_00750Not AvailableNegative147486 - 14827428982.2
30s ribosomal protein s2B7X54_00755Not AvailablePositive148544 - 14927527067.6

Displaying genes 141 – 150 of 2122 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.