Hyphomicrobium nitrativorans NL23

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Hyphomicrobium nitrativorans NL23 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This species is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Hyphomicrobium nitrativorans NL23 possesses a single replicon, which is essential for its genetic stability and replication processes. Its genomic information can be accessed through the accession number NC_022997.1, providing a resource for further studies on its genetic and metabolic pathways. In terms of ecological significance, Hyphomicrobium nitrativorans NL23 is known for its role in the nitrogen cycle, particularly in the process of nitrification. This bacterium contributes to the conversion of ammonium to nitrite, which is a crucial step in the transformation of nitrogen in various ecosystems. Its aerobic nature and specific metabolic capabilities suggest that it may thrive in environments where oxygen is readily available, such as in well-aerated soils or aquatic systems. Overall, the traits of Hyphomicrobium nitrativorans NL23 highlight its importance in nitrogen biogeochemistry, as it aids in nutrient cycling and impacts soil fertility and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium nitrativorans
StrainNL23

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomicrobium nitrativorans NL23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium nitrativorans NL23, complete sequence.

Gene Summary

Adenine Count

643212 bp

Thymine Count

676392 bp

Guanine Count

1195450 bp

Cytosine Count

1138782 bp

Genome Length

3653837 bp

Protein-coding Genes

3360 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopantothenoylcysteine decarboxylaseW911_RS03130Not AvailablePositive677472 - 67874944684.9
cell cycle transcriptional regulator trcrW911_RS03135Not AvailablePositive678783 - 67922615179.4
cysteine synthase aW911_RS03140Not AvailablePositive679530 - 68052834562.9
pdz domain-containing proteinW911_RS17130Not AvailablePositive680565 - 68199250039.2
pyridoxal-phosphate-dependent aminotransferase family proteinW911_RS03150Not AvailableNegative682181 - 68338643318.0
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigW911_RS03155Not AvailableNegative683605 - 68440228548.8
aspartate kinaseW911_RS03160Not AvailablePositive684610 - 68587244307.4
phosphoenolpyruvate--protein phosphotransferaseW911_RS03165Not AvailablePositive686040 - 68830182324.1
peptide chain release factor 1W911_RS03170Not AvailablePositive688495 - 68958039993.6
peptide chain release factor n(5)-glutamine methyltransferaseW911_RS03175Not AvailablePositive689570 - 69046931485.6

Displaying genes 651 – 660 of 3430 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.