Hyphomicrobium nitrativorans NL23

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Hyphomicrobium nitrativorans NL23 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This species is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Hyphomicrobium nitrativorans NL23 possesses a single replicon, which is essential for its genetic stability and replication processes. Its genomic information can be accessed through the accession number NC_022997.1, providing a resource for further studies on its genetic and metabolic pathways. In terms of ecological significance, Hyphomicrobium nitrativorans NL23 is known for its role in the nitrogen cycle, particularly in the process of nitrification. This bacterium contributes to the conversion of ammonium to nitrite, which is a crucial step in the transformation of nitrogen in various ecosystems. Its aerobic nature and specific metabolic capabilities suggest that it may thrive in environments where oxygen is readily available, such as in well-aerated soils or aquatic systems. Overall, the traits of Hyphomicrobium nitrativorans NL23 highlight its importance in nitrogen biogeochemistry, as it aids in nutrient cycling and impacts soil fertility and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium nitrativorans
StrainNL23

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomicrobium nitrativorans NL23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium nitrativorans NL23, complete sequence.

Gene Summary

Adenine Count

643212 bp

Thymine Count

676392 bp

Guanine Count

1195450 bp

Cytosine Count

1138782 bp

Genome Length

3653837 bp

Protein-coding Genes

3360 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein zapeW911_RS02230Not AvailablePositive498904 - 50004041610.0
malate dehydrogenaseW911_RS02235Not AvailablePositive500410 - 50137533848.7
adp-forming succinate--coa ligase subunit betaW911_RS02240Not AvailablePositive501510 - 50270942397.5
succinate--coa ligase subunit alphaW911_RS02245Not AvailablePositive502752 - 50365130499.0
hypothetical proteinW911_RS02250Not AvailablePositive503717 - 5039959643.15
2-oxoglutarate dehydrogenase e1 componentW911_RS02255Not AvailablePositive504168 - 507116110326.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseW911_RS02260Not AvailablePositive507207 - 50849946125.4
dihydrolipoyl dehydrogenaseW911_RS02265Not AvailablePositive508551 - 50995448813.9
trab/gumn family proteinW911_RS02270Not AvailableNegative510105 - 51114837732.6
tyrosine recombinase xercW911_RS02275Not AvailableNegative511237 - 51219934783.1

Displaying genes 471 – 480 of 3430 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.