Hyphomicrobium nitrativorans NL23

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Hyphomicrobium nitrativorans NL23 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This species is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Hyphomicrobium nitrativorans NL23 possesses a single replicon, which is essential for its genetic stability and replication processes. Its genomic information can be accessed through the accession number NC_022997.1, providing a resource for further studies on its genetic and metabolic pathways. In terms of ecological significance, Hyphomicrobium nitrativorans NL23 is known for its role in the nitrogen cycle, particularly in the process of nitrification. This bacterium contributes to the conversion of ammonium to nitrite, which is a crucial step in the transformation of nitrogen in various ecosystems. Its aerobic nature and specific metabolic capabilities suggest that it may thrive in environments where oxygen is readily available, such as in well-aerated soils or aquatic systems. Overall, the traits of Hyphomicrobium nitrativorans NL23 highlight its importance in nitrogen biogeochemistry, as it aids in nutrient cycling and impacts soil fertility and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium nitrativorans
StrainNL23

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomicrobium nitrativorans NL23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium nitrativorans NL23, complete sequence.

Gene Summary

Adenine Count

643212 bp

Thymine Count

676392 bp

Guanine Count

1195450 bp

Cytosine Count

1138782 bp

Genome Length

3653837 bp

Protein-coding Genes

3360 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smr/muts family proteinW911_RS01790Not AvailableNegative402647 - 40329724015.2
murein transglycosylase aW911_RS01795Not AvailableNegative403303 - 40442439695.7
tim44/tima family putative adaptor proteinW911_RS01800Not AvailableNegative404452 - 40519227326.6
protein-export chaperone secbW911_RS01805Not AvailablePositive405545 - 40605118469.3
dna polymerase iii subunit epsilonW911_RS01810Not AvailableNegative406180 - 40690526242.4
dephospho-coa kinaseW911_RS01815Not AvailableNegative406923 - 40754322506.8
shikimate dehydrogenaseW911_RS01820Not AvailableNegative407540 - 40838530761.4
maf family proteinW911_RS01825Not AvailableNegative408382 - 40899621452.0
pyruvate, water dikinase regulatory proteinW911_RS01830Not AvailableNegative408986 - 40986732654.0
hypothetical proteinW911_RS18845Not AvailablePositive409961 - 4100924633.47

Displaying genes 381 – 390 of 3430 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.