Hyphomicrobium nitrativorans NL23

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Hyphomicrobium nitrativorans NL23 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This species is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Hyphomicrobium nitrativorans NL23 possesses a single replicon, which is essential for its genetic stability and replication processes. Its genomic information can be accessed through the accession number NC_022997.1, providing a resource for further studies on its genetic and metabolic pathways. In terms of ecological significance, Hyphomicrobium nitrativorans NL23 is known for its role in the nitrogen cycle, particularly in the process of nitrification. This bacterium contributes to the conversion of ammonium to nitrite, which is a crucial step in the transformation of nitrogen in various ecosystems. Its aerobic nature and specific metabolic capabilities suggest that it may thrive in environments where oxygen is readily available, such as in well-aerated soils or aquatic systems. Overall, the traits of Hyphomicrobium nitrativorans NL23 highlight its importance in nitrogen biogeochemistry, as it aids in nutrient cycling and impacts soil fertility and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium nitrativorans
StrainNL23

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomicrobium nitrativorans NL23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium nitrativorans NL23, complete sequence.

Gene Summary

Adenine Count

643212 bp

Thymine Count

676392 bp

Guanine Count

1195450 bp

Cytosine Count

1138782 bp

Genome Length

3653837 bp

Protein-coding Genes

3360 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease iiiW911_RS00765Not AvailablePositive173093 - 17381226262.8
imidazole glycerol phosphate synthase subunit hisfW911_RS00770Not AvailableNegative174045 - 17483027601.0
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseW911_RS00775Not AvailableNegative175204 - 17593225600.9
hypothetical proteinW911_RS00780Not AvailablePositive176046 - 17635411787.1
hypothetical proteinW911_RS00785Not AvailablePositive176576 - 17693813362.0
ycii family proteinW911_RS00790Not AvailablePositive177150 - 17756915342.0
orotate phosphoribosyltransferaseW911_RS00795Not AvailableNegative177631 - 17818819790.9
hypothetical proteinW911_RS17980Not AvailablePositive178345 - 17872814145.5
imidazole glycerol phosphate synthase subunit hishW911_RS00800Not AvailableNegative178697 - 17935023270.8
duf2628 domain-containing proteinW911_RS17045Not AvailableNegative179358 - 17993621050.3

Displaying genes 171 – 180 of 3430 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.