Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yjag family proteinVIBNI_RS15750Not AvailableNegative3490588 - 349118122813.0
d-2-hydroxyacid dehydrogenaseVIBNI_RS15755Not AvailablePositive3491246 - 349217234363.8
uracil-dna glycosylase family proteinVIBNI_RS15760Not AvailablePositive3492172 - 349275021863.7
uroporphyrinogen decarboxylaseVIBNI_RS15765Not AvailableNegative3492962 - 349402939357.4
nad(+) diphosphataseVIBNI_RS15770Not AvailableNegative3494326 - 349509328848.7
rsd/algq family anti-sigma factorVIBNI_RS15775Not AvailablePositive3495276 - 349576718513.9
dna-directed rna polymerase subunit beta'VIBNI_RS15780Not AvailableNegative3495984 - 3500180155023.0
dna-directed rna polymerase subunit betaVIBNI_RS15785Not AvailableNegative3500254 - 3504282149759.0
50s ribosomal protein l7/l12VIBNI_RS15790Not AvailableNegative3504532 - 350490012236.7
50s ribosomal protein l10VIBNI_RS15795Not AvailableNegative3504958 - 350544917430.8

Displaying genes 5161 – 5170 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.