Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spfh domain-containing proteinVIBNI_RS15400Not AvailableNegative3414289 - 341568052020.1
carbohydrate-binding proteinVIBNI_RS15405Not AvailableNegative3415914 - 341649521601.1
elongation factor pVIBNI_RS15410Not AvailableNegative3416666 - 341723220594.7
ef-p beta-lysylation protein epmbVIBNI_RS15415Not AvailablePositive3417265 - 341828738482.9
vc2662 family proteinVIBNI_RS15420Not AvailableNegative3418327 - 341889019424.5
mgtc/sapb family proteinVIBNI_RS15425Not AvailablePositive3419108 - 341959017147.6
pdc sensor domain-containing proteinVIBNI_RS15430Not AvailableNegative3419595 - 342104655008.6
chaperonin groelVIBNI_RS15435Not AvailableNegative3421265 - 342291157460.2
co-chaperone groesVIBNI_RS15440Not AvailableNegative3422970 - 342326010281.5
mate family efflux transporterVIBNI_RS15445Not AvailablePositive3423541 - 342489048375.1

Displaying genes 5091 – 5100 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.