Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ytfj family proteinVIBNI_RS14750Not AvailablePositive3304325 - 330487619589.5
rida family proteinVIBNI_RS14755Not AvailableNegative3304949 - 330534114357.2
amidohydrolase family proteinVIBNI_RS14760Not AvailableNegative3305385 - 330682152000.9
amino acid deaminaseVIBNI_RS14765Not AvailablePositive3307181 - 330843446569.5
rida family proteinVIBNI_RS14770Not AvailablePositive3308526 - 330891513896.6
m48 family metallopeptidaseVIBNI_RS14775Not AvailableNegative3308996 - 330999136937.2
yjgn family proteinVIBNI_RS14780Not AvailableNegative3309991 - 331112742033.1
bifunctional helix-turn-helix transcriptional regulator/gnat family n-acetyltransferaseVIBNI_RS28925Not AvailablePositive3311578 - 331248333241.6
glycosyl hydrolase 2 galactose-binding domain-containing proteinVIBNI_RS14790Not AvailableNegative3312527 - 331332430182.8
ribonuclease e inhibitor rrabVIBNI_RS14795Not AvailableNegative3313499 - 331390915618.7

Displaying genes 4961 – 4970 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.