Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter large permease subunitVIBNI_RS11655Not AvailablePositive2626000 - 262738549708.3
uracil phosphoribosyltransferaseVIBNI_RS11660Not AvailableNegative2627530 - 262815622682.9
phosphoribosylformylglycinamidine cyclo-ligaseVIBNI_RS11665Not AvailablePositive2628406 - 262944636728.7
phosphoribosylglycinamide formyltransferaseVIBNI_RS11670Not AvailablePositive2629450 - 263008823416.8
class ii glutamine amidotransferaseVIBNI_RS11675Not AvailableNegative2630166 - 263101132060.7
d-sedoheptulose 7-phosphate isomeraseVIBNI_RS11680Not AvailableNegative2631026 - 263160120752.8
acyl-coa dehydrogenase fadeVIBNI_RS11685Not AvailablePositive2631952 - 263439989078.2
hypothetical proteinVIBNI_RS11690Not AvailablePositive2634816 - 263738695402.8
tigr03503 family proteinVIBNI_RS11695Not AvailableNegative2637519 - 263877547373.0
dna polymerase iii subunit epsilonVIBNI_RS11700Not AvailableNegative2638784 - 263952427537.7

Displaying genes 4341 – 4350 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.