Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family dna-binding transcriptional regulatorVIBNI_RS10175Not AvailableNegative2299517 - 230055137663.7
sugar abc transporter substrate-binding proteinVIBNI_RS10180Not AvailableNegative2300794 - 230175934584.5
atp-binding cassette domain-containing proteinVIBNI_RS10185Not AvailableNegative2301871 - 230267429019.2
abc transporter permeaseVIBNI_RS10190Not AvailableNegative2302695 - 230382239893.6
tim barrel proteinVIBNI_RS10195Not AvailableNegative2303878 - 230476833428.5
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)VIBNI_RS10200Not AvailablePositive2305020 - 230687667864.5
gfo/idh/moca family proteinVIBNI_RS10205Not AvailablePositive2306887 - 230806543672.5
5-dehydro-2-deoxygluconokinaseVIBNI_RS10210Not AvailablePositive2308058 - 230913138192.3
5-deoxy-glucuronate isomeraseVIBNI_RS10215Not AvailablePositive2309124 - 230998131763.9
class ii fructose-bisphosphate aldolaseVIBNI_RS10220Not AvailablePositive2309994 - 231082430209.6

Displaying genes 4041 – 4050 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.