Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-dependent oxidoreductaseVIBNI_RS20490Not AvailableNegative423552 - 42417223436.0
qnr family pentapeptide repeat proteinVIBNI_RS20495Not AvailablePositive424497 - 42515025153.4
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudVIBNI_RS20500Not AvailableNegative425259 - 42601426871.0
5-dehydro-4-deoxy-d-glucuronate isomeraseVIBNI_RS20505Not AvailableNegative426024 - 42685431574.1
trap transporter large permeaseVIBNI_RS20510Not AvailableNegative426939 - 42821644536.7
trap transporter small permeaseVIBNI_RS20515Not AvailableNegative428213 - 42884223804.9
sialic acid trap transporter substrate-binding protein siapVIBNI_RS20520Not AvailableNegative428912 - 42990736923.8
fadr/gntr family transcriptional regulatorVIBNI_RS20525Not AvailablePositive430386 - 43108726135.4
bnr repeat-containing proteinVIBNI_RS20530Not AvailablePositive431400 - 43379388674.0
glycoside hydrolase family 88 proteinVIBNI_RS20535Not AvailablePositive433844 - 43617186214.8

Displaying genes 361 – 370 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.