Vibrio nigripulchritudo

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio nigripulchritudo is a bacterium characterized by having two replicons. The organism is cataloged under two different GenBank accession numbers: NC_022528.1 and NC_022543.1. These accessions provide a genetic framework for studying its genomic features and potential functions. The presence of multiple replicons in Vibrio nigripulchritudo may suggest a complex regulatory mechanism for gene expression and replication, which is often associated with adaptability in various environments. This trait is significant as it may contribute to the bacterium's survival and ecological interactions in aquatic ecosystems where it is typically found. Understanding the genomic structure of Vibrio nigripulchritudo, as represented by its accessions, could offer insights into its metabolic capabilities and environmental adaptations. This knowledge could be valuable in studying its role in biogeochemical cycles or its interactions with other microorganisms and higher organisms in marine environments. Overall, the dual replicon system may play a critical role in the ecological dynamics of Vibrio nigripulchritudo, highlighting its potential significance in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio nigripulchritudo
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio nigripulchritudo
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio nigripulchritudo chromosome 2, complete sequence.

Gene Summary

Adenine Count

603952 bp

Thymine Count

601928 bp

Guanine Count

503235 bp

Cytosine Count

503300 bp

Genome Length

2212415 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

6 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dyp-type peroxidaseVIBNI_RS04945Not AvailableNegative1092561 - 109416259517.5
hypothetical proteinVIBNI_RS04950Not AvailableNegative1094162 - 109485125919.2
hypothetical proteinVIBNI_RS04955Not AvailableNegative1094867 - 109552324899.5
cytochrome p450VIBNI_RS04960Not AvailableNegative1095631 - 109689047644.9
lysr substrate-binding domain-containing proteinVIBNI_RS04965Not AvailableNegative1097161 - 109804833268.2
aspartate aminotransferase family proteinVIBNI_RS04970Not AvailablePositive1098187 - 109953049424.1
3-keto-5-aminohexanoate cleavage proteinVIBNI_RS04975Not AvailablePositive1099518 - 110033629902.2
taxi family trap transporter solute-binding subunitVIBNI_RS04980Not AvailablePositive1100508 - 110145233639.9
substrate-binding domain-containing proteinVIBNI_RS04985Not AvailablePositive1101602 - 110261836717.6
atp-binding proteinVIBNI_RS04990Not AvailablePositive1102615 - 1105293100181.0

Displaying genes 3011 – 3020 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.