Thermococcus litoralis DSM 5473

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus litoralis DSM 5473 is a Gram-negative archaeon that exhibits motility through the presence of flagella. This characteristic is significant as it contributes to the organism's ability to navigate its environment, which is typically extreme due to its classification within the Thermococcus genus. The organism is characterized by a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptability in its ecological niche. The accession number for Thermococcus litoralis DSM 5473 is NC_022084.1, which provides a reference point for researchers interested in genomic studies or comparative analysis with other microorganisms. In terms of biological and ecological insights, Thermococcus litoralis is often found in high-temperature environments, such as hydrothermal vents, where it plays a role in biogeochemical cycles. Its ability to thrive in extreme conditions positions it as a model organism for studying thermophilic adaptation and potential applications in biotechnology, particularly in processes that require high temperatures. Understanding the traits of Thermococcus litoralis can elucidate the mechanisms of survival and function in extreme environments, contributing to our broader knowledge of microbial ecology and the evolution of life in harsh conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus litoralis
StrainDSM 5473

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus litoralis DSM 5473


Gene Summary

Adenine Count

628058 bp

Thymine Count

632615 bp

Guanine Count

476480 bp

Cytosine Count

477975 bp

Genome Length

2215172 bp

Protein-coding Genes

2463 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinOCC_RS00195Not AvailableNegative38780 - 3939422468.2
radical sam proteinOCC_RS00200Not AvailablePositive39497 - 4050438804.1
tigr00269 family proteinOCC_RS00205Not AvailableNegative40491 - 4145636875.8
rad55 family atpaseOCC_RS00210Not AvailablePositive41573 - 4230728595.8
tigr00725 family proteinOCC_RS00215Not AvailableNegative42300 - 4281218552.7
site-2 protease family proteinOCC_RS00220Not AvailableNegative42817 - 4395041504.9
biotin/lipoate a/b protein ligase family proteinOCC_RS00225Not AvailableNegative44090 - 4483928475.3
signal peptidase iOCC_RS00230Not AvailableNegative44963 - 4547219035.6
duf531 domain-containing proteinOCC_RS00235Not AvailableNegative45454 - 4600220576.2
hypothetical proteinOCC_RS00240Not AvailablePositive46074 - 4714440679.7

Displaying genes 41 – 50 of 2515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

10 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002812aldehydo-D-glucose 6-phosphateC6H13O9PChemical structure of aldehydo-D-glucose 6-phosphateNot available
Average260.1358Da
Monoisotopic260.0297185Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0014035Glycolic acidC2H4O3Chemical structure of Glycolic acid79-14-1
Average76.0514Da
Monoisotopic76.016043994Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039911Acinetobacter radioresistens NIPH 2130Not available138-08-9Not available
BASm0040037Clostridium sticklandii DSM 519Not availableNot availableNot available
BASm0040110Mycobacterium tuberculosis CDC1551Not availableNot availableNot available

Displaying 1–10 of 10 metabolites

Health Effects

No health effects information available for this bacterium.