Hyphomicrobium denitrificans 1NES1

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Hyphomicrobium denitrificans 1NES1 is a Gram-negative bacterium characterized as aerobic and exhibiting a bacilli shape. This organism is non-motile, possessing flagella, which may indicate a capacity for other forms of movement or attachment in its environment, despite lacking the ability to swim independently. It thrives within a mesophilic temperature range, suitable for growth at moderate temperatures. H. denitrificans 1NES1 is classified as free-living, which suggests it can exist independently without reliance on a host. This feature allows it to inhabit various ecological niches, where it may contribute to nutrient cycling and ecosystem dynamics. The bacterium has a single replicon, indicating a relatively simple genomic organization that could reflect its ecological adaptability. The accession number NC_021172.1 provides a reference for the genomic sequence of H. denitrificans 1NES1, facilitating further research into its genetic and metabolic pathways. Understanding the traits of this bacterium is crucial for exploring its role in denitrification processes, where it may participate in the nitrogen cycle, thereby impacting soil fertility and environmental health. Overall, H. denitrificans 1NES1 serves as an important organism within microbial ecology, particularly in contexts related to denitrification and nutrient cycling in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium denitrificans
Strain1NES1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomicrobium denitrificans 1NES1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium denitrificans 1NES1, complete sequence.

Gene Summary

Adenine Count

760389 bp

Thymine Count

774480 bp

Guanine Count

1149112 bp

Cytosine Count

1124706 bp

Genome Length

3808687 bp

Protein-coding Genes

3557 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyprenyl synthetase family proteinHYPDE_RS14560Not AvailablePositive3047234 - 304826237086.3
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseHYPDE_RS14565Not AvailableNegative3048259 - 304912530047.3
tetratricopeptide repeat proteinHYPDE_RS14570Not AvailableNegative3049213 - 305103067167.7
electron transfer flavoprotein-ubiquinone oxidoreductaseHYPDE_RS14575Not AvailableNegative3051240 - 305292860215.2
uracil-dna glycosylase family proteinHYPDE_RS14580Not AvailablePositive3053064 - 305391830697.9
gyri-like domain-containing proteinHYPDE_RS14585Not AvailablePositive3054121 - 305464519553.4
molybdenum cofactor biosynthesis protein bHYPDE_RS14590Not AvailablePositive3054738 - 305528019429.3
glycosyltransferaseHYPDE_RS14595Not AvailableNegative3055277 - 305598125485.9
pa0069 family radical sam proteinHYPDE_RS14600Not AvailablePositive3056127 - 305723641234.4
ribonuclease hiiHYPDE_RS14605Not AvailablePositive3057267 - 305796225015.4

Displaying genes 2881 – 2890 of 3628 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.