Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | M104/1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1026076 bp
Thymine Count
1094241 bp
Guanine Count
669768 bp
Cytosine Count
776487 bp
Genome Length
3698419 bp
Protein-coding Genes
3490 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | ERE_RS04700 | Not Available | Negative | 1022790 - 1024079 | 45764.5 |
| trap transporter small permease | ERE_RS04705 | Not Available | Negative | 1024080 - 1024697 | 24118.8 |
| type i 3-dehydroquinate dehydratase | ERE_RS04710 | Not Available | Negative | 1024886 - 1025647 | 27730.7 |
| mfs transporter | ERE_RS04715 | Not Available | Negative | 1025715 - 1026926 | 42787.0 |
| shikimate dehydrogenase | ERE_RS04720 | Not Available | Negative | 1026985 - 1027863 | 31995.7 |
| lysr family transcriptional regulator | ERE_RS04725 | Not Available | Positive | 1028125 - 1029006 | 32960.4 |
| lysr family transcriptional regulator | ERE_RS04730 | Not Available | Negative | 1029003 - 1029884 | 33445.3 |
| nad(p)/fad-dependent oxidoreductase | ERE_RS04735 | Not Available | Positive | 1030473 - 1032473 | 73160.3 |
| shikimate dehydrogenase | ERE_RS04740 | Not Available | Negative | 1033809 - 1034678 | 31155.5 |
| duf4160 domain-containing protein | ERE_RS04745 | Not Available | Positive | 1034850 - 1035113 | 10034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

