Agathobacter rectalis M104/1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis M104/1 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph, utilizing organic compounds for energy. This species is classified as an anaerobe, meaning it grows in the absence of oxygen. Agathobacter rectalis M104/1 has a mesophilic temperature range, with an optimal growth temperature of 37°C, indicating it is well-suited for environments that are moderately warm, such as the human gut. This bacterium has a single membrane and contains one replicon, reflecting its relatively simple cellular structure. Agathobacter rectalis M104/1 is nonsporulating, which suggests that it does not form spores as a means of survival in unfavorable conditions. As a free-living organism, it contributes to the microbial diversity in its various habitats. The presence of flagella implies potential motility, although the bacterium is noted to be non-motile in practical terms. This characteristic may limit its movement within its environment, directing its interactions and ecological role. In summary, Agathobacter rectalis M104/1 plays a significant role in anaerobic ecosystems, particularly in the gut microbiota, contributing to the breakdown of organic materials. Its adaptation to a mesophilic environment and reliance on organic substrates indicates its importance in nutrient cycling and maintaining microbial balance in its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainM104/1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis M104/1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis M104/1, complete sequence.

Gene Summary

Adenine Count

1026076 bp

Thymine Count

1094241 bp

Guanine Count

669768 bp

Cytosine Count

776487 bp

Genome Length

3698419 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribulose-phosphate 3-epimeraseERE_RS02900Not AvailableNegative590586 - 59123623271.4
ribosome small subunit-dependent gtpase aERE_RS02905Not AvailableNegative591265 - 59217334257.1
stk1 family pasta domain-containing ser/thr kinaseERE_RS02910Not AvailableNegative592673 - 59482377109.9
stp1/irep family pp2c-type ser/thr phosphataseERE_RS02915Not AvailableNegative594840 - 59556826457.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnERE_RS02920Not AvailableNegative595569 - 59663340053.5
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbERE_RS02925Not AvailableNegative596828 - 59823752891.4
zinc metallopeptidaseERE_RS02930Not AvailableNegative598343 - 59904725499.3
methionyl-trna formyltransferaseERE_RS02935Not AvailableNegative599513 - 60044534207.2
peptide deformylaseERE_RS02940Not AvailableNegative600500 - 60097617397.9
primosomal protein n'ERE_RS02945Not AvailableNegative600998 - 60325984122.2

Displaying genes 581 – 590 of 3547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.