Agathobacter rectalis M104/1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis M104/1 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph, utilizing organic compounds for energy. This species is classified as an anaerobe, meaning it grows in the absence of oxygen. Agathobacter rectalis M104/1 has a mesophilic temperature range, with an optimal growth temperature of 37°C, indicating it is well-suited for environments that are moderately warm, such as the human gut. This bacterium has a single membrane and contains one replicon, reflecting its relatively simple cellular structure. Agathobacter rectalis M104/1 is nonsporulating, which suggests that it does not form spores as a means of survival in unfavorable conditions. As a free-living organism, it contributes to the microbial diversity in its various habitats. The presence of flagella implies potential motility, although the bacterium is noted to be non-motile in practical terms. This characteristic may limit its movement within its environment, directing its interactions and ecological role. In summary, Agathobacter rectalis M104/1 plays a significant role in anaerobic ecosystems, particularly in the gut microbiota, contributing to the breakdown of organic materials. Its adaptation to a mesophilic environment and reliance on organic substrates indicates its importance in nutrient cycling and maintaining microbial balance in its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainM104/1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis M104/1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis M104/1, complete sequence.

Gene Summary

Adenine Count

1026076 bp

Thymine Count

1094241 bp

Guanine Count

669768 bp

Cytosine Count

776487 bp

Genome Length

3698419 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine--trna ligaseERE_RS14845Not AvailablePositive3152728 - 315470175731.1
duf1540 domain-containing proteinERE_RS14850Not AvailablePositive3154771 - 315508811513.6
prolipoprotein diacylglyceryl transferaseERE_RS14855Not AvailablePositive3155226 - 315612533545.6
division/cell wall cluster transcriptional repressor mrazERE_RS14860Not AvailablePositive3156339 - 315677016507.7
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhERE_RS14865Not AvailablePositive3156790 - 315773435354.2
hypothetical proteinERE_RS14870Not AvailablePositive3157759 - 315823518095.4
penicillin-binding protein 2ERE_RS14875Not AvailablePositive3158251 - 316021272258.6
peptidoglycan d,d-transpeptidase ftsi family proteinERE_RS14880Not AvailablePositive3160272 - 316196362061.1
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseERE_RS14885Not AvailablePositive3162094 - 316345550237.9
putative lipid ii flippase ftswERE_RS14890Not AvailablePositive3163461 - 316460641994.4

Displaying genes 2971 – 2980 of 3547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.