Agathobacter rectalis M104/1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis M104/1 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph, utilizing organic compounds for energy. This species is classified as an anaerobe, meaning it grows in the absence of oxygen. Agathobacter rectalis M104/1 has a mesophilic temperature range, with an optimal growth temperature of 37°C, indicating it is well-suited for environments that are moderately warm, such as the human gut. This bacterium has a single membrane and contains one replicon, reflecting its relatively simple cellular structure. Agathobacter rectalis M104/1 is nonsporulating, which suggests that it does not form spores as a means of survival in unfavorable conditions. As a free-living organism, it contributes to the microbial diversity in its various habitats. The presence of flagella implies potential motility, although the bacterium is noted to be non-motile in practical terms. This characteristic may limit its movement within its environment, directing its interactions and ecological role. In summary, Agathobacter rectalis M104/1 plays a significant role in anaerobic ecosystems, particularly in the gut microbiota, contributing to the breakdown of organic materials. Its adaptation to a mesophilic environment and reliance on organic substrates indicates its importance in nutrient cycling and maintaining microbial balance in its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainM104/1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis M104/1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis M104/1, complete sequence.

Gene Summary

Adenine Count

1026076 bp

Thymine Count

1094241 bp

Guanine Count

669768 bp

Cytosine Count

776487 bp

Genome Length

3698419 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03936 family radical sam-associated proteinERE_RS12745Not AvailableNegative2700658 - 270137727325.9
tigr03960 family b12-binding radical sam proteinERE_RS12750Not AvailableNegative2701367 - 270322971509.8
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieERE_RS12755Not AvailableNegative2703264 - 270454748380.0
imidazoleglycerol-phosphate dehydratase hisbERE_RS12760Not AvailableNegative2704549 - 270513921613.9
histidinol dehydrogenaseERE_RS12765Not AvailableNegative2705155 - 270644447156.2
atp phosphoribosyltransferaseERE_RS12770Not AvailableNegative2706487 - 270713424238.7
atp phosphoribosyltransferase regulatory subunitERE_RS12775Not AvailableNegative2707138 - 270832844815.4
holliday junction resolvase recuERE_RS12780Not AvailableNegative2708401 - 270893420554.6
rlua family pseudouridine synthaseERE_RS12785Not AvailableNegative2708994 - 270996836552.4
ygiq family radical sam proteinERE_RS12790Not AvailableNegative2709987 - 271198775218.4

Displaying genes 2551 – 2560 of 3547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.