Agathobacter rectalis M104/1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis M104/1 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph, utilizing organic compounds for energy. This species is classified as an anaerobe, meaning it grows in the absence of oxygen. Agathobacter rectalis M104/1 has a mesophilic temperature range, with an optimal growth temperature of 37°C, indicating it is well-suited for environments that are moderately warm, such as the human gut. This bacterium has a single membrane and contains one replicon, reflecting its relatively simple cellular structure. Agathobacter rectalis M104/1 is nonsporulating, which suggests that it does not form spores as a means of survival in unfavorable conditions. As a free-living organism, it contributes to the microbial diversity in its various habitats. The presence of flagella implies potential motility, although the bacterium is noted to be non-motile in practical terms. This characteristic may limit its movement within its environment, directing its interactions and ecological role. In summary, Agathobacter rectalis M104/1 plays a significant role in anaerobic ecosystems, particularly in the gut microbiota, contributing to the breakdown of organic materials. Its adaptation to a mesophilic environment and reliance on organic substrates indicates its importance in nutrient cycling and maintaining microbial balance in its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainM104/1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis M104/1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis M104/1, complete sequence.

Gene Summary

Adenine Count

1026076 bp

Thymine Count

1094241 bp

Guanine Count

669768 bp

Cytosine Count

776487 bp

Genome Length

3698419 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-containing alcohol dehydrogenaseERE_RS09000Not AvailableNegative1924387 - 192554141757.4
sigma-54-dependent fis family transcriptional regulatorERE_RS09005Not AvailablePositive1925824 - 192760566643.4
duf5300 domain-containing proteinERE_RS09010Not AvailableNegative1927609 - 192795612597.7
hypothetical proteinERE_RS09015Not AvailablePositive1928410 - 192876314009.9
hypothetical proteinERE_RS09025Not AvailableNegative1929218 - 19294579459.3
duf1847 domain-containing proteinERE_RS09030Not AvailableNegative1929530 - 193016823703.6
duf6199 family natural product biosynthesis proteinERE_RS09035Not AvailableNegative1930693 - 19309359268.8
prevent-host-death family proteinERE_RS09040Not AvailableNegative1932356 - 19325778549.41
Trna-glyNot AvailableNot AvailablePositive1932771 - 1932843Not Available
Trna-glyNot AvailableNot AvailablePositive1933140 - 1933212Not Available

Displaying genes 1801 – 1810 of 3547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.