Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | M104/1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1026076 bp
Thymine Count
1094241 bp
Guanine Count
669768 bp
Cytosine Count
776487 bp
Genome Length
3698419 bp
Protein-coding Genes
3490 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | ERE_RS07595 | Not Available | Negative | 1635429 - 1636760 | 49602.8 |
| nadp-dependent malic enzyme | ERE_RS07600 | Not Available | Positive | 1637040 - 1638188 | 40901.3 |
| tigr01212 family radical sam protein | ERE_RS07605 | Not Available | Positive | 1638190 - 1639098 | 34217.3 |
| duf4364 family protein | ERE_RS07610 | Not Available | Positive | 1639110 - 1639625 | 19812.3 |
| flavin reductase family protein | ERE_RS07615 | Not Available | Negative | 1639627 - 1640196 | 20873.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ERE_RS07620 | Not Available | Negative | 1640243 - 1641127 | 31518.3 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ERE_RS07625 | Not Available | Negative | 1641196 - 1642668 | 54462.4 |
| diaminopimelate epimerase | ERE_RS07630 | Not Available | Negative | 1642786 - 1643643 | 31721.8 |
| arac family transcriptional regulator | ERE_RS07635 | Not Available | Positive | 1643794 - 1644630 | 32140.3 |
| putative manganese-dependent inorganic diphosphatase | ERE_RS07640 | Not Available | Negative | 1644679 - 1646328 | 61158.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

