Agathobacter rectalis M104/1

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis M104/1 is a Gram-positive, non-motile, rod-shaped bacterium that thrives as a chemoheterotroph, utilizing organic compounds for energy. This species is classified as an anaerobe, meaning it grows in the absence of oxygen. Agathobacter rectalis M104/1 has a mesophilic temperature range, with an optimal growth temperature of 37°C, indicating it is well-suited for environments that are moderately warm, such as the human gut. This bacterium has a single membrane and contains one replicon, reflecting its relatively simple cellular structure. Agathobacter rectalis M104/1 is nonsporulating, which suggests that it does not form spores as a means of survival in unfavorable conditions. As a free-living organism, it contributes to the microbial diversity in its various habitats. The presence of flagella implies potential motility, although the bacterium is noted to be non-motile in practical terms. This characteristic may limit its movement within its environment, directing its interactions and ecological role. In summary, Agathobacter rectalis M104/1 plays a significant role in anaerobic ecosystems, particularly in the gut microbiota, contributing to the breakdown of organic materials. Its adaptation to a mesophilic environment and reliance on organic substrates indicates its importance in nutrient cycling and maintaining microbial balance in its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainM104/1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis M104/1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis M104/1, complete sequence.

Gene Summary

Adenine Count

1026076 bp

Thymine Count

1094241 bp

Guanine Count

669768 bp

Cytosine Count

776487 bp

Genome Length

3698419 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseERE_RS07395Not AvailableNegative1591237 - 159277856484.6
triose-phosphate isomeraseERE_RS07400Not AvailableNegative1592956 - 159370526696.1
phosphoglycerate kinaseERE_RS07405Not AvailableNegative1593776 - 159500843349.3
type i glyceraldehyde-3-phosphate dehydrogenaseERE_RS07410Not AvailableNegative1595200 - 159621636344.1
histidinol-phosphatase hisj family proteinERE_RS07415Not AvailablePositive1596533 - 159733930594.2
nicotinate phosphoribosyltransferaseERE_RS07420Not AvailableNegative1598045 - 159925646796.7
phosphoribosylformylglycinamidine synthaseERE_RS07425Not AvailableNegative1599522 - 1603325140348.0
lysr family transcriptional regulatorERE_RS07430Not AvailablePositive1603578 - 160446833547.9
atp-dependent dna helicaseERE_RS07435Not AvailableNegative1604439 - 160690795857.0
phosphocarrier protein hprERE_RS07440Not AvailableNegative1606963 - 16071968643.29

Displaying genes 1481 – 1490 of 3547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.