Eubacterium siraeum 70/3

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Eubacterium siraeum 70/3 is a bacterium characterized by a single replicon, indicating a streamlined genomic structure. The organism is indexed under the accession number NC_021011.1, which provides a reference for its genetic information. As a member of the genus Eubacterium, E. siraeum 70/3 contributes to the diverse microbial community found in various environments. Eubacteria are known for their roles in human health and disease, particularly in the gut microbiome, where they can influence digestion and immune responses. The presence of a singular replicon suggests that E. siraeum 70/3 may have adaptations that allow it to thrive in specific ecological niches. This could indicate a particular efficiency in replication and gene expression, which may confer advantages in its natural habitat. Understanding the genomic structure of Eubacterium siraeum 70/3 can provide insights into its metabolic capabilities and ecological roles. Further studies could elucidate its interactions within microbial communities and its potential applications in biotechnology or medicine.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium siraeum 70/3 draft genome.

Gene Summary

Adenine Count

787777 bp

Thymine Count

790102 bp

Guanine Count

643423 bp

Cytosine Count

642835 bp

Genome Length

2943413 bp

Protein-coding Genes

2323 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cellobiose phosphorylaseEUS_19830Not AvailablePositive2022119 - 202462094413.2
hypothetical proteinEUS_19840Not AvailableNegative2024750 - 202594645863.1
helix-turn-helix, psq domain.EUS_19850Not AvailableNegative2025952 - 20261858978.89
predicted transcriptional regulatorsEUS_19860Not AvailablePositive2026292 - 202661812217.8
yhge/pip n-terminal domain/yhge/pip c-terminal domainEUS_19890Not AvailablePositive2028755 - 203092378862.2
dihydroorotate oxidase b, catalytic subunitEUS_19900Not AvailableNegative2031817 - 203273732459.5
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductasesEUS_19910Not AvailableNegative2032734 - 203350727167.1
carbamoyl-phosphate synthase large subunitEUS_19930Not AvailableNegative2034223 - 2037429118059.0
carbamoyl-phosphate synthase small subunitEUS_19940Not AvailableNegative2037420 - 203853840916.8
orotidine 5'-phosphate decarboxylase, subfamily 2EUS_19950Not AvailableNegative2038581 - 203952534296.3

Displaying genes 1721 – 1730 of 2169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

298 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 298 metabolites

Health Effects

No health effects information available for this bacterium.