Polaribacter sp. MED152

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. MED152 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession number NC_020830.1, which provides a reference for its genetic information and potential applications in research. This bacterium, belonging to the genus Polaribacter, is typically found in polar marine environments, where it plays a role in the degradation of organic materials. The ecological significance of Polaribacter sp. MED152 lies in its potential contributions to biogeochemical cycles, particularly in the context of nutrient cycling in cold marine ecosystems. Its adaptation to low temperatures and specific ecological niches suggests that it may be involved in the breakdown of complex organic compounds, facilitating nutrient availability for other marine organisms. The study of Polaribacter sp. MED152 may offer insights into microbial diversity and functional roles in extreme environments, highlighting the importance of such microorganisms in maintaining ecological balance. Understanding the characteristics and behaviors of this bacterium can enhance knowledge of microbial community dynamics in polar regions and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp. MED152
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. MED152
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. MED152


Gene Summary

Adenine Count

1031253 bp

Thymine Count

1024352 bp

Guanine Count

455555 bp

Cytosine Count

450314 bp

Genome Length

2961474 bp

Protein-coding Genes

2627 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMED152_RS00115Not AvailableNegative25963 - 2653221798.9
heavy-metal-associated domain-containing proteinMED152_RS00120Not AvailableNegative26990 - 2743015871.7
efflux rnd transporter periplasmic adaptor subunitMED152_RS00125Q9ZHD0Negative27448 - 2922965787.5
duf305 domain-containing proteinMED152_RS00130Not AvailableNegative29219 - 2971018984.7
pepsy domain-containing proteinMED152_RS00135Not AvailableNegative29728 - 3044427925.7
duf2911 domain-containing proteinMED152_RS00140Not AvailableNegative30448 - 3087916374.7
heavy metal translocating p-type atpaseMED152_RS00145Q5ZWR1Negative31053 - 3355491125.7
tolc family proteinMED152_RS00150Not AvailableNegative33641 - 3487947494.8
efflux rnd transporter permease subunitMED152_RS00155Q8XBY1Negative34876 - 38598137162.0
hyc_cc_pp family proteinMED152_RS00160Not AvailableNegative38708 - 3912115946.4

Displaying genes 21 – 30 of 2667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

174 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 174 metabolites

Health Effects

No health effects information available for this bacterium.