Polaribacter sp. MED152

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. MED152 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession number NC_020830.1, which provides a reference for its genetic information and potential applications in research. This bacterium, belonging to the genus Polaribacter, is typically found in polar marine environments, where it plays a role in the degradation of organic materials. The ecological significance of Polaribacter sp. MED152 lies in its potential contributions to biogeochemical cycles, particularly in the context of nutrient cycling in cold marine ecosystems. Its adaptation to low temperatures and specific ecological niches suggests that it may be involved in the breakdown of complex organic compounds, facilitating nutrient availability for other marine organisms. The study of Polaribacter sp. MED152 may offer insights into microbial diversity and functional roles in extreme environments, highlighting the importance of such microorganisms in maintaining ecological balance. Understanding the characteristics and behaviors of this bacterium can enhance knowledge of microbial community dynamics in polar regions and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp. MED152
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. MED152
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. MED152, complete sequence.

Gene Summary

Adenine Count

1031253 bp

Thymine Count

1024352 bp

Guanine Count

455555 bp

Cytosine Count

450314 bp

Genome Length

2961474 bp

Protein-coding Genes

2627 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipocalin family proteinMED152_RS09075Not AvailablePositive2054662 - 205512017512.2
ompa family proteinMED152_RS09080P37665Positive2055124 - 205582824930.6
head gin domain-containing proteinMED152_RS09085Not AvailableNegative2055877 - 205675832948.4
hypothetical proteinMED152_RS09090Not AvailableNegative2056763 - 205714614724.4
doxx family proteinMED152_RS09095Not AvailableNegative2057156 - 205765318647.4
arac family transcriptional regulatorMED152_RS09100Not AvailableNegative2057801 - 205898546013.3
xanthine dehydrogenase family protein molybdopterin-binding subunitMED152_RS09105P17201Negative2058990 - 206114079028.2
(2fe-2s)-binding proteinMED152_RS09110Q51697Negative2061160 - 206161816636.8
glycosyl hydrolase 53 family proteinMED152_RS09115P48841Negative2061707 - 206286143913.0
single-stranded dna-binding proteinMED152_RS09120Q9PHE7Negative2062953 - 206328812576.0

Displaying genes 1821 – 1830 of 2667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

174 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 174 metabolites

Health Effects

No health effects information available for this bacterium.