Pseudomonas sp. ATCC 13867

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ATCC 13867 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization. The genomic sequence of this strain is documented under the accession number NC_020829.1, providing a reference for its genetic and functional analysis. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse environments. This versatility often makes them important in bioremediation and biotechnological applications, as they can degrade a variety of organic pollutants. The ability of Pseudomonas sp. ATCC 13867 to adapt to different ecological niches may be attributed to its genomic features, including the potential for horizontal gene transfer, which contributes to the acquisition of new metabolic capabilities. In ecological contexts, Pseudomonas species play significant roles in nutrient cycling and plant growth promotion. They are often found in soil and water ecosystems, where they contribute to the decomposition of organic matter and the recycling of nutrients. Understanding the specific traits and genomic characteristics of Pseudomonas sp. ATCC 13867 can provide insights into its ecological functions and potential applications in environmental microbiology. Overall, the study of this strain contributes to a broader understanding of the ecological roles of Pseudomonas species in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ATCC 13867
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ATCC 13867
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ATCC 13867, complete sequence.

Gene Summary

Adenine Count

989743 bp

Thymine Count

990328 bp

Guanine Count

1855582 bp

Cytosine Count

1860654 bp

Genome Length

5696307 bp

Protein-coding Genes

5097 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyectoine utilization dehydratase eutbH681_RS00235Not AvailablePositive59795 - 6076934080.2
cyclodeaminaseH681_RS00240Not AvailablePositive60762 - 6175435120.3
ectoine hydrolase doeaH681_RS00245Not AvailablePositive61885 - 6307544430.9
n(2)-acetyl-l-2,4-diaminobutanoate deacetylase doebH681_RS00250Not AvailablePositive63080 - 6409636320.6
lrp/asnc family transcriptional regulatorH681_RS00255Not AvailablePositive64110 - 6459518380.4
7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporterH681_RS00260Not AvailablePositive64841 - 6549124381.4
nad-dependent succinate-semialdehyde dehydrogenaseH681_RS00265Not AvailablePositive65625 - 6708252275.6
aminotransferaseH681_RS00270Not AvailablePositive67099 - 6847849257.9
tetratricopeptide repeat proteinH681_RS00275Not AvailableNegative68628 - 6894511266.6
trk system potassium transporter trkaH681_RS00280Not AvailableNegative68963 - 7033650027.2

Displaying genes 51 – 60 of 5180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.