Pseudomonas sp. ATCC 13867

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ATCC 13867 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization. The genomic sequence of this strain is documented under the accession number NC_020829.1, providing a reference for its genetic and functional analysis. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse environments. This versatility often makes them important in bioremediation and biotechnological applications, as they can degrade a variety of organic pollutants. The ability of Pseudomonas sp. ATCC 13867 to adapt to different ecological niches may be attributed to its genomic features, including the potential for horizontal gene transfer, which contributes to the acquisition of new metabolic capabilities. In ecological contexts, Pseudomonas species play significant roles in nutrient cycling and plant growth promotion. They are often found in soil and water ecosystems, where they contribute to the decomposition of organic matter and the recycling of nutrients. Understanding the specific traits and genomic characteristics of Pseudomonas sp. ATCC 13867 can provide insights into its ecological functions and potential applications in environmental microbiology. Overall, the study of this strain contributes to a broader understanding of the ecological roles of Pseudomonas species in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ATCC 13867
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ATCC 13867
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ATCC 13867, complete sequence.

Gene Summary

Adenine Count

989743 bp

Thymine Count

990328 bp

Guanine Count

1855582 bp

Cytosine Count

1860654 bp

Genome Length

5696307 bp

Protein-coding Genes

5097 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit deltaH681_RS24675Not AvailablePositive5511079 - 551140812413.6
sarcosine oxidase subunit alphaH681_RS24680Not AvailablePositive5511409 - 5514429109714.0
sarcosine oxidase subunit gammaH681_RS24685Not AvailablePositive5514615 - 551525023159.6
formyltetrahydrofolate deformylaseH681_RS24690Not AvailablePositive5515361 - 551621832203.6
formaldehyde dehydrogenase, glutathione-independentH681_RS24695Not AvailablePositive5516470 - 551766942045.6
duf1993 family proteinH681_RS24700Not AvailablePositive5518072 - 551864421064.3
fatty acid--coa ligaseH681_RS24705Not AvailableNegative5518688 - 552026557136.4
acyl-coa dehydrogenase family proteinH681_RS24710Not AvailableNegative5520336 - 552157445154.8
acyl-coa dehydrogenase family proteinH681_RS24715Not AvailableNegative5521583 - 552270740390.4
class ii histone deacetylaseH681_RS24720Not AvailableNegative5522861 - 552397339768.4

Displaying genes 5021 – 5030 of 5180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.