Pseudomonas sp. ATCC 13867

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ATCC 13867 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic organization. The genomic sequence of this strain is documented under the accession number NC_020829.1, providing a reference for its genetic and functional analysis. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse environments. This versatility often makes them important in bioremediation and biotechnological applications, as they can degrade a variety of organic pollutants. The ability of Pseudomonas sp. ATCC 13867 to adapt to different ecological niches may be attributed to its genomic features, including the potential for horizontal gene transfer, which contributes to the acquisition of new metabolic capabilities. In ecological contexts, Pseudomonas species play significant roles in nutrient cycling and plant growth promotion. They are often found in soil and water ecosystems, where they contribute to the decomposition of organic matter and the recycling of nutrients. Understanding the specific traits and genomic characteristics of Pseudomonas sp. ATCC 13867 can provide insights into its ecological functions and potential applications in environmental microbiology. Overall, the study of this strain contributes to a broader understanding of the ecological roles of Pseudomonas species in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ATCC 13867
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ATCC 13867
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ATCC 13867, complete sequence.

Gene Summary

Adenine Count

989743 bp

Thymine Count

990328 bp

Guanine Count

1855582 bp

Cytosine Count

1860654 bp

Genome Length

5696307 bp

Protein-coding Genes

5097 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tolc family proteinH681_RS14835Not AvailableNegative3347505 - 334874945835.4
shlb/fhac/hecb family hemolysin secretion/activation proteinH681_RS25935Not AvailableNegative3349440 - 334996019274.8
gnat family n-acetyltransferaseH681_RS14845Not AvailableNegative3350049 - 335055519547.7
type vi secretion system protein tssaH681_RS14850Not AvailableNegative3350777 - 335183538779.2
type vi secretion protein icmf/tssm n-terminal domain-containing proteinH681_RS14855Not AvailableNegative3351832 - 3355656141892.0
dotu family type iv/vi secretion system proteinH681_RS14860Not AvailableNegative3355653 - 335642328596.3
type vi secretion system baseplate subunit tsskH681_RS14865Not AvailableNegative3356436 - 335776447251.1
type vi secretion proteinH681_RS14870Not AvailableNegative3357821 - 335827616819.3
type vi secretion system contractile sheath small subunitH681_RS14875Not AvailablePositive3358504 - 335907620939.5
type vi secretion system contractile sheath large subunitH681_RS14880Not AvailablePositive3359101 - 336058855076.3

Displaying genes 3021 – 3030 of 5180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.