Helicobacter pylori OK113

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori OK113 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella. It is notable for its habitat, which is host-associated, indicating a relationship with living organisms. This bacterium typically exists as single cells rather than in clusters or arrangements. The optimal growth temperature for H. pylori OK113 is 37°C, placing it within the mesophilic temperature range, which is conducive to its survival in warm-blooded hosts. H. pylori OK113 has a unique cellular structure, possessing two membranes and a single replicon, which is indicative of its genetic organization. Despite being free-living, this bacterium's relationship with hosts is significant as it is commonly associated with the human stomach, where it can influence gastric health. The presence of flagella aids in its mobility, although it is described as not being mobile in the same context as other motile organisms. Overall, the traits of H. pylori OK113 underscore its specialized adaptation to a host-associated environment, offering insights into its role in human health and disease, particularly regarding gastrointestinal conditions. The accession number for further genomic information is NC_020508.1.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainOK113

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori OK113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori OK113


Gene Summary

Adenine Count

493576 bp

Thymine Count

496924 bp

Guanine Count

311702 bp

Cytosine Count

314415 bp

Genome Length

1616617 bp

Protein-coding Genes

1517 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate mutaseHPOK113_RS01555Not AvailablePositive313122 - 31341211458.0
duf2156 domain-containing proteinHPOK113_RS01560Not AvailablePositive313425 - 31429733877.4
bifunctional chorismate-binding protein/class iv aminotransferaseHPOK113_RS01565Not AvailablePositive314298 - 31598365165.6
aliphatic amidaseHPOK113_RS01570Not AvailablePositive316202 - 31718536497.6
flagellar hook-associated protein flglHPOK113_RS01575Not AvailableNegative317268 - 31972190638.3
50s ribosomal protein l21HPOK113_RS01580Not AvailablePositive319996 - 32031011807.7
50s ribosomal protein l27HPOK113_RS01585Not AvailablePositive320325 - 3205919778.76
abc transporter substrate-binding proteinHPOK113_RS01590Not AvailablePositive320708 - 32235762448.0
abc transporter permeaseHPOK113_RS01595Not AvailablePositive322367 - 32337136936.4
abc transporter permeaseHPOK113_RS01600Not AvailablePositive323371 - 32422830818.9

Displaying genes 301 – 310 of 1562 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.