Helicobacter pylori OK113

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori OK113 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella. It is notable for its habitat, which is host-associated, indicating a relationship with living organisms. This bacterium typically exists as single cells rather than in clusters or arrangements. The optimal growth temperature for H. pylori OK113 is 37°C, placing it within the mesophilic temperature range, which is conducive to its survival in warm-blooded hosts. H. pylori OK113 has a unique cellular structure, possessing two membranes and a single replicon, which is indicative of its genetic organization. Despite being free-living, this bacterium's relationship with hosts is significant as it is commonly associated with the human stomach, where it can influence gastric health. The presence of flagella aids in its mobility, although it is described as not being mobile in the same context as other motile organisms. Overall, the traits of H. pylori OK113 underscore its specialized adaptation to a host-associated environment, offering insights into its role in human health and disease, particularly regarding gastrointestinal conditions. The accession number for further genomic information is NC_020508.1.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainOK113

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori OK113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori OK113, complete sequence.

Gene Summary

Adenine Count

493576 bp

Thymine Count

496924 bp

Guanine Count

311702 bp

Cytosine Count

314415 bp

Genome Length

1616617 bp

Protein-coding Genes

1517 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf507 family proteinHPOK113_RS06130Not AvailablePositive1277693 - 127824422165.7
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitHPOK113_RS06135Not AvailablePositive1278244 - 127937141892.1
formamidaseHPOK113_RS06140Not AvailablePositive1279539 - 128054337307.6
hypothetical proteinHPOK113_RS08250Not AvailableNegative1280618 - 12808819655.03
septum formation inhibitor mafHPOK113_RS06150Not AvailableNegative1280996 - 128156821227.7
alanine--trna ligaseHPOK113_RS06155Not AvailableNegative1281570 - 128411394985.7
ydch family proteinHPOK113_RS06160Not AvailablePositive1284233 - 12844639111.73
hop family adhesin babbHPOK113_RS06165Not AvailableNegative1285094 - 128722377526.6
30s ribosomal protein s18HPOK113_RS06170Not AvailableNegative1287479 - 128773610434.9
single-stranded dna-binding proteinHPOK113_RS06175Not AvailableNegative1287759 - 128830420305.7

Displaying genes 1221 – 1230 of 1562 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.